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See other KDM5C CNV Assays ›
Gene Symbol
KDM5C
Assay Reference Genome
Location

Chr.X:53192366 on build GRCh38
Cytoband
Xp11.22
Assay ID Hs00185693_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8242

Gene Name:

 lysine demethylase 5C

Gene Aliases:

 DXS1272E, JARID1C, MRX13, MRXJ, MRXSCJ, MRXSJ, SMCX, XE169

Location:

 Chr.X:53159735-53225422 on Build GRCh38

Assay Gene Location:

 Within Exon 28
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KDM5C NM_001146702.1 24 5051 NP_001140174.1
NM_001282622.1 26 5814 NP_001269551.1
NM_004187.3 26 5817 NP_004178.2
XM_005262035.4 26 5621 XP_005262092.1
XM_011530824.2 26 5552 XP_011529126.1
XM_011530825.2 25 5507 XP_011529127.1
XM_011530826.2 25 5498 XP_011529128.1
XM_011530827.2 XP_011529129.1
XM_011530828.1 XP_011529130.1
XM_011530829.2 27 5699 XP_011529131.1
XM_011530830.2 27 5646 XP_011529132.1
XM_011530831.2 20 4638 XP_011529133.1
XM_017029886.1 XP_016885375.1
XM_017029887.1 XP_016885376.1
XM_017029888.1 XP_016885377.1
XM_017029889.1 XP_016885378.1
BC054499.2 26 5568 AAH54499.1
EF613277.1
L25270.1 26 5815 AAA61302.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2740175 Chr.X:52862926 - 55652533 on Build GRCh38 Deletion FAM156B GNL3L KANTR TRO HSD17B10 PFKFB1 SNORA11 RIBC1 USP51 MIRLET7F2 LOC100421746 TSR2 GPR173 WNK3 FAM156A MIR6895 MIR98 SMC1A MIR4536-2 FGD1 MAGED2 ITIH6 MTRNR2L10 XAGE3 IQSEC2 ALAS2 HUWE1 KDM5C MAGEH1 APEX2 PHF8 MIR6894 FAM104B PAGE2 FOXR2 MIR6857 MIR4536-1 SNORA109 FAM120C PAGE5 PAGE2B TSPYL2 PAGE3
nsv435891 Chr.X:52861979 - 55653313 on Build GRCh38 Deletion FAM156B GNL3L KANTR TRO HSD17B10 PFKFB1 SNORA11 RIBC1 USP51 MIRLET7F2 LOC100421746 TSR2 GPR173 WNK3 FAM156A MIR6895 MIR98 SMC1A MIR4536-2 FGD1 MAGED2 ITIH6 MTRNR2L10 XAGE3 IQSEC2 ALAS2 HUWE1 KDM5C MAGEH1 APEX2 PHF8 MIR6894 FAM104B PAGE2 FOXR2 MIR6857 MIR4536-1 SNORA109 FAM120C PAGE5 PAGE2B TSPYL2 PAGE3

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