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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1774313 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00195689_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 NP_001244299.1
XM_017023025.1 XP_016878514.1
XM_017023026.1 XP_016878515.1
AK074080.2 BAB84906.2
EF452422.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NME3 NUBP2 MIR3177 MRPS34 MAPK8IP3 SPSB3 EME2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HBA1 PRR35 MRPL28 METTL26 TPSG1 RAB11FIP3 RAB40C ZNF598 NME3 METRN PKD1 MRPS34 TELO2 FAM173A MIR4516 SNORA64 AMDHD2 TMEM204 LOC652276 HBQ1 SLC9A3R2 MIR3180-5 LOC100134368 TBL3 MEIOB LINC00254 SNORA78 C16orf59 PRSS27 WDR24 LOC105371038 FLJ42627 DDX11L10 LOC105371049 MIR6511B1 PRR25 ABCA17P LOC107987233 MAPK8IP3 LINC00235 PTX4 E4F1 MIR3176 CRAMP1 LOC105371045 GFER SNRNP25 WASIR2 PIGQ HAGHL PGP ECI1 MIR6859-4 MPG MIR3177 SSTR5 SNHG19 NME4 WFIKKN1 TRAF7 NARFL PDIA2 TSC2 LOC105371184 RPL23AP5 PRSS29P NTN3 MSRB1 RHOT2 FAM234A SPSB3 MIR1225 TMEM8A CCDC78 NUBP2 NHLRC4 NPW JMJD8 RHBDL1 ERVK13-1 MIR5587 HBA2 C1QTNF8 LUC7L LMF1 CLCN7 HS3ST6 LOC107984876 MIR6767 POLR3K NTHL1 EME2 LOC105371046 ATP6V0C RGS11 MCRIP2 GNPTG HBZ CHTF18 RPUSD1 WDR90 MIR662 IFT140 RAB26 LOC105371047 HN1L IGFALS MSLN CASKIN1 FBXL16 RPS2 DECR2 HAGH MIR3178 SOX8 SNORD60 RPL3L C16orf91 MLST8 PDPK1 CACNA1H NDUFB10 NPRL3 ABCA3 BAIAP3 MIR940 UBE2I LOC100287175 CCNF RNPS1 LMF1-AS1 RHBDF1 RNF151 LOC101929280 TPSB2 ARHGDIG FAHD1 SNHG9 LOC729652 TSR3 TPSD1 TPSAB1 KCTD5 CAPN15 STUB1 SYNGR3 NOXO1 MIR4717 HBM CEMP1 TBC1D24 SSTR5-AS1 AXIN1 CCDC154 GNG13 DNASE1L2 BRICD5 MIR6768 UNKL MIR3677 SNORA10 LOC106660606
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss NME3 MRPS34 MAPK8IP3 SPSB3 EME2
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NME3 NUBP2 MIR3177 IGFALS MRPS34 MAPK8IP3 SPSB3 EME2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NME3 NUBP2 IGFALS MRPS34 MAPK8IP3 SPSB3 EME2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss HN1L IGFALS HAGH SPSB3 EME2 LOC105371046 NME3 NUBP2 MIR3177 MRPS34 IFT140 MAPK8IP3 CRAMP1
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NME3 NUBP2 IGFALS MRPS34 MAPK8IP3 SPSB3 EME2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss HN1L IGFALS HAGH MEIOB SPSB3 EME2 LOC105371046 NME3 NUBP2 MIR3177 MRPS34 TELO2 FAHD1 IFT140 MAPK8IP3 TMEM204 CRAMP1 LOC105371047
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NME3 NUBP2 IGFALS MRPS34 MAPK8IP3 SPSB3 EME2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss HN1L IGFALS HAGH MEIOB SPSB3 EME2 NME3 NUBP2 MIR3177 MRPS34 FAHD1 MAPK8IP3 CRAMP1
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss NME3 MRPS34 MAPK8IP3 SPSB3 EME2
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion NME3 NUBP2 MIR3177 IGFALS MRPS34 FAHD1 HAGH MAPK8IP3 SPSB3 EME2
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NME3 NUBP2 IGFALS MRPS34 MAPK8IP3 SPSB3 EME2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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