Genomic Map
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Target Gene Details
Entrez Gene ID: | 7080 |
Gene Name: | NK2 homeobox 1 |
Gene Aliases: |
BCH, BHC, NK-2, NKX2.1, NKX2A, NMTC1, T/EBP, TEBP, TITF1, TTF-1, TTF1 |
Location: |
Chr.14:36516397-36520225 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NKX2-1 | NM_001079668.2 | NP_001073136.1 | ||
| NM_003317.3 | NP_003308.1 | |||
| BC006221.2 | AAH06221.2 | |||
| BE796718.1 | ||||
| BT009773.1 | AAP88775.1 | |||
| D50740.1 | BAA23529.1 | |||
| U33749.1 | AAB52381.1 | |||
| U43203.1 | AAA89066.1 |
Target Gene Details
Entrez Gene ID: | 100506237 |
Gene Name: | NKX2-1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.14:36519278-36523016 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 1 - Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NKX2-1-AS1 | NR_103710.1 | |||
| BX161496.1 | CAD61942.1 | |||
| DA256249.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv23132 | Chr.14:36517126 - 36521753 on Build GRCh38 | Loss |
 NKX2-1-AS1
NKX2-1
|
| nsv564346 | Chr.14:36518805 - 36520644 on Build GRCh38 | Loss |
NKX2-1-AS1
NKX2-1
|
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Additional Information:
For this assay, SNP(s) [rs149047715] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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