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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1300524 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00209976_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D UBE2J2 ACAP3 MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss GABRD FAM132A CDK11A B3GALT6 MIR429 TMEM240 LOC284600 FNDC10 TTLL10 SCNN1D MIR6859-2 LOC105378589 CALML6 MMP23A MORN1 LINC01128 FAM138A PUSL1 TMEM88B ANKRD65 DDX11L1 ATAD3B LOC105378948 PLEKHN1 ATAD3A ATAD3C LOC100288069 MMP23B VWA1 DVL1 TMEM52 FAAP20 LOC100133331 AGRN LOC100134822 LOC148413 SAMD11 WASH7P LINC00115 LOC107984841 LOC100132287 LOC105378592 SKI LOC729737 SSU72 MTND2P28 UBE2J2 LOC102725121 HES4 LOC107985728 NADK SLC35E2B OR4F5 MIR6808 C1orf159 CPSF3L RNF223 LOC105378591 PERM1 MIR6726 MIR200A SLC35E2 MIB2 LOC100129534 CPTP ISG15 MIR200B LOC100130417 LINC01342 CCNL2 LOC102724312 TNFRSF18 OR4F29 CFAP74 AURKAIP1 MIR6859-1 LOC101928626 GNB1 LOC100287934 FAM41C NOC2L KLHL17 LOC105378949 LOC107985729 MXRA8 SDF4 MTND1P23 PRKCZ MRPL20 ACAP3 LOC100506504 LOC105378947 MIR6727 OR4F16 LOC100288175 TAS1R3 TTLL10-AS1 MIR6723 TNFRSF4 CDK11B MIR1302-2 FAM87B
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D SDF4 FAM132A UBE2J2 ACAP3 B3GALT6 MIR6726
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6808 DVL1 CPSF3L TAS1R3 ACAP3 PUSL1 CPTP MIR6726 MIR6727
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss MIR200B C1orf159 FAM132A LINC01342 RNF223 TTLL10-AS1 B3GALT6 MIR429 TNFRSF4 MIR6726 TTLL10 TNFRSF18 SCNN1D SDF4 MIR200A UBE2J2 ACAP3
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication C1orf159 CPSF3L FAM132A RNF223 B3GALT6 MIR429 MIR6726 TTLL10 AGRN SCNN1D SDF4 MIR200A ACAP3 CPTP MIR6727 MIR200B LOC100288175 LINC01342 TAS1R3 TTLL10-AS1 PUSL1 TNFRSF4 TNFRSF18 LOC105378948 UBE2J2
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MXRA8 MIR6808 DVL1 SCNN1D CPSF3L TAS1R3 AURKAIP1 ACAP3 PUSL1 CPTP MIR6726 MIR6727
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR6808 C1orf159 CPSF3L FAM132A RNF223 CDK11A B3GALT6 MIR429 TMEM240 PERM1 MIR6726 LOC284600 FNDC10 TTLL10 SCNN1D MIR200A SLC35E2 MIB2 MMP23A CPTP ISG15 MIR200B LOC100130417 LINC01342 CCNL2 LINC01128 PUSL1 TMEM88B ANKRD65 LOC102724312 TNFRSF18 ATAD3B LOC105378948 AURKAIP1 PLEKHN1 ATAD3A ATAD3C LOC100288069 MMP23B VWA1 DVL1 LOC100287934 FAM41C NOC2L KLHL17 LOC107985729 MXRA8 AGRN LOC148413 SDF4 SAMD11 MRPL20 ACAP3 LINC00115 MIR6727 LOC100288175 TAS1R3 TTLL10-AS1 TNFRSF4 SSU72 CDK11B UBE2J2 HES4 FAM87B LOC107985728 NADK SLC35E2B
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MMP23B VWA1 MIR6808 DVL1 C1orf159 CPSF3L FAM132A B3GALT6 MIR429 TMEM240 MIR6726 FNDC10 LOC107985729 TTLL10 MXRA8 SCNN1D LOC148413 SDF4 MIR200A MIB2 MRPL20 ACAP3 CPTP MIR6727 MIR200B LINC01342 CCNL2 TAS1R3 TTLL10-AS1 PUSL1 TMEM88B TNFRSF4 ANKRD65 LOC102724312 TNFRSF18 SSU72 ATAD3B CDK11B UBE2J2 AURKAIP1 ATAD3A ATAD3C
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MXRA8 MIR6808 DVL1 SCNN1D CPSF3L TAS1R3 ACAP3 PUSL1 CPTP MIR6726 MIR6727
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6808 DVL1 CPSF3L TAS1R3 PUSL1 MIR6726 MXRA8 SCNN1D UBE2J2 AURKAIP1 ACAP3 CPTP MIR6727
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6808 DVL1 C1orf159 CPSF3L FAM132A RNF223 NOC2L B3GALT6 MIR429 PERM1 KLHL17 MIR6726 LOC284600 TTLL10 MXRA8 AGRN SCNN1D LOC148413 SDF4 MIR200A SAMD11 MRPL20 ACAP3 CPTP ISG15 MIR6727 MIR200B LOC100130417 LOC100288175 LINC01342 CCNL2 TAS1R3 TTLL10-AS1 PUSL1 TMEM88B TNFRSF4 ANKRD65 TNFRSF18 LOC105378948 UBE2J2 AURKAIP1 HES4 PLEKHN1 LOC107985728
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR200B CPSF3L FAM132A TTLL10-AS1 PUSL1 B3GALT6 MIR429 TNFRSF4 MIR6726 TTLL10 TNFRSF18 SCNN1D SDF4 MIR200A UBE2J2 ACAP3 MIR6727

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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