Name: [Hs00238301_cn] [ERCC1]
Creator: Thermo Fisher Scientific
Keywords: [ERCC1] Assay, [ERCC excision repair 1, endonuclease non-catalytic subunit] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	2067
Gene Name:	ERCC excision repair 1, endonuclease non-catalytic subunit
Gene Aliases:	COFS4, RAD10, UV20
Location:	Chr.19:45407333-45478866 on Build GRCh38
Assay Gene Location:	Within Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ERCC1	NM_001166049.1	2	197	NP_001159521.1
	NM_001983.3	2	197	NP_001974.1
	NM_202001.2	1	239	NP_973730.1
	XM_005258634.1	2	128	XP_005258691.1
	XM_005258635.2	2	598	XP_005258692.1
	XM_005258636.4	2	189	XP_005258693.1
	XM_005258637.1	2	128	XP_005258694.1
	XM_011526610.2	2	144	XP_011524912.1
	XM_017026459.1	2	125	XP_016881948.1
	XM_017026460.1	2	598	XP_016881949.1
	XM_017026461.1	3	227	XP_016881950.1
	XM_017026462.1	3	192	XP_016881951.1
	XM_017026463.1	2	184	XP_016881952.1
	XM_017026464.1	2	185	XP_016881953.1
	XM_017026465.1	2	598	XP_016881954.1
	XM_017026466.1	3	232	XP_016881955.1
	AB069681.1	2	117	BAB62810.1
	AF001925.1	2	193	AAC16253.1
	AF433652.1	2	172	AAL56574.1
	AK092039.1	2	151
	AK314884.1	2	129
	BC008930.2	2	113	AAH08930.1
	BC052813.1	1	182	AAH52813.1
	BM789972.1	1	221
	BQ671113.1	2	197
	BT019806.1	1	51	AAV38609.1
	DB468563.1
	M13194.1	2	193	AAA52394.1
	M28650.1	2	193	AAA35810.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833845	Chr.19:45308814 - 45457371 on Build GRCh38	Loss	KLC3 ERCC1 CKM CD3EAP MIR6088 ERCC2 PPP1R13L
nsv833846	Chr.19:45381005 - 45469089 on Build GRCh38	Loss	FOSB ERCC1 CD3EAP MIR6088 PPP1R13L
nsv428365	Chr.19:45358027 - 45469089 on Build GRCh38	Gain+Loss	FOSB ERCC1 CD3EAP MIR6088 ERCC2 PPP1R13L