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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88882704 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00247675_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AF052220.1 AAC64698.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS LOC107987238 LOC101927793 TRAPPC2L APRT PABPN1L CBFA2T3 LOC100129697 LOC105371409 PIEZO1 CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CDH15 GALNS LOC107987238 LOC400558 LOC101927793 SLC22A31 LOC100129697 LOC105371409 LOC339059 TRAPPC2L APRT PABPN1L CBFA2T3 PIEZO1 CTU2 ZNF778 CDT1 ACSF3 LINC00304 LOC100289580 MIR4722
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion LOC101927793 PABPN1L CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDH15 GALNS LOC107987238 LOC400558 LOC101927793 SLC22A31 LOC100129697 LOC105371409 TRAPPC2L APRT PABPN1L CBFA2T3 CDT1 ACSF3 LINC00304
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CDH15 GALNS LOC107987238 LOC400558 LOC101927793 SLC22A31 LOC100129697 LOC105371409 LOC100287036 ANKRD11 LOC339059 TRAPPC2L APRT PABPN1L CBFA2T3 LOC105371414 PIEZO1 ZNF778 CDT1 ACSF3 LINC00304 LOC100289580
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS LOC107987238 LOC101927793 TRAPPC2L APRT PABPN1L CBFA2T3 PIEZO1 CDT1
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS LOC107987238 LOC101927793 TRAPPC2L APRT PABPN1L CBFA2T3 LOC100129697 LOC105371409 CDT1
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDH15 GALNS LOC107987238 LOC400558 LOC101927793 LOC100129697 LOC105371409 TRAPPC2L APRT PABPN1L CBFA2T3 CDT1 ACSF3 LINC00304
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 LOC101927793 RNF166 SLC22A31 LOC100287036 CYBA GAS8-AS1 CBFA2T3 LOC105371414 PIEZO1 ZNF778 CDT1 ACSF3 TCF25 LINC00304 AFG3L1P GALNS FAM157C LOC107987238 TUBB8P7 SPIRE2 SNAI3 LOC105371409 VPS9D1-AS1 ANKRD11 TUBB3 URAHP SNAI3-AS1 APRT SPG7 PABPN1L LOC107984817 DBNDD1 ZNF276 MIR4722 CDH15 LOC400558 CENPBD1 GAS8 MVD VPS9D1 RPL13 LOC101927817 SPATA2L CHMP1A FANCA SPATA33 MC1R CTU2 CPNE7 DPEP1 LOC100129697 CDK10 LOC339059 IL17C TRAPPC2L SNORD68 PRDM7 LOC105371419 LOC100289580
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS LOC107987238 LOC101927793 LOC100129697 LOC105371409 LOC339059 TRAPPC2L APRT PABPN1L CBFA2T3 PIEZO1 CTU2 CDT1 LOC100289580 MIR4722

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