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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3469400 on build GRCh38
Cytoband
17p13.2
Assay ID Hs00252119_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 NP_001164166.1
NM_001170696.1 NP_001164167.1
NM_001170697.1 NP_001164168.1
NM_001170698.1 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 NP_001308265.1
NM_001321337.1 NP_001308266.1
NM_032598.4 NP_115987.2
AF367472.1 AAK53408.1
AK295299.1
AK301892.1
AY032684.1 AAK51120.1
AY035867.1 AAK61373.1
AY035868.1 AAK61374.1
BC029483.1 AAH29483.1
BG716998.1
BI463957.1
BP371122.1
DB450733.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR3A1 OR3A2 OR3A4P TRPV3 OR3A3 OR1D4 OR1A2 TRPV1 OR1E1 SPATA22 ASPA OR1A1 OR1E2
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain OR3A1 OR3A2 OR3A4P TRPV3 ITGAE P2RX5-TAX1BP3 TAX1BP3 OR1D4 P2RX5 OR1A2 GSG2 ATP2A3 LOC101927911 OR1E2 MIR1253 CCDC92B OR1G1 OR3A3 OR1D5 LOC105371592 NCBP3 CTNS P2RX1 PAFAH1B1 TRPV1 CLUH OR1D2 SHPK EMC6 RAP1GAP2 OR1E1 SPATA22 LOC105371591 ASPA CAMKK1 OR1A1 MIR6776
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain OR3A1 OR3A2 OR3A4P OR3A3 OR1E1 SPATA22 ASPA OR1E2
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion OR3A1 OR3A2 OR3A4P TRPV3 CCDC92B OR1G1 OR3A3 OR1D5 LOC105371592 OR1D4 OR1A2 PAFAH1B1 CLUH OR1D2 RAP1GAP2 OR1E1 SPATA22 LOC105371591 ASPA LOC101927911 OR1A1 OR1E2 MIR1253 MIR6776
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain OR3A2 TRPV3 ITGAE OR3A3 NCBP3 P2RX5-TAX1BP3 TAX1BP3 CTNS P2RX5 TRPV1 GSG2 SHPK EMC6 OR1E1 SPATA22 ASPA CAMKK1 OR1E2
nsv528368 Chr.17:3459775 - 3507608 on Build GRCh38 Gain SPATA22 ASPA
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss OR3A2 TRPV3 OR3A3 OR1E1 SPATA22 ASPA OR1E2
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss TRPV3 OR3A3 TRPV1 SHPK SPATA22 ASPA OR1E2

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