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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1295891 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00263844_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 18 1624 NP_085152.2
XM_005244715.2 18 1660 XP_005244772.1
XM_005244717.3 6 618 XP_005244774.1
XM_011540606.2 18 1673 XP_011538908.1
XM_011540607.1 18 4097 XP_011538909.1
XM_011540608.2 17 1578 XP_011538910.1
XM_011540609.2 18 1674 XP_011538911.1
XM_017000233.1 18 1813 XP_016855722.1
AB051503.1 17 3289 BAB21807.1
AF411981.1 16 1424 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 3 228 AAH04874.2
BC021851.1 AAH21851.1
BC051194.1 18 1624 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726 UBE2J2
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726 SDF4 FAM132A UBE2J2 B3GALT6
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC105378947 MIB2 MORN1 TAS1R3 MIR6859-1 UBE2J2 LINC01342 LOC100134822 FAM41C MIR6727 FAM132A MMP23B LOC100287934 ISG15 GNB1 SAMD11 ACAP3 LOC105378948 LOC100132287 PUSL1 MIR429 NOC2L C1orf159 MIR6723 LOC102725121 CCNL2 AURKAIP1 MIR200A LOC107984841 ANKRD65 CPTP OR4F29 SLC35E2B TTLL10 SSU72 MRPL20 LOC105378592 MTND1P23 WASH7P FAAP20 DDX11L1 SLC35E2 LOC100288175 TMEM240 CALML6 TNFRSF18 LOC105378949 MIR6808 CFAP74 LOC100130417 SDF4 LOC100288069 FAM138A FAM87B MTND2P28 CPSF3L B3GALT6 SCNN1D LOC101928626 TMEM88B PERM1 MIR6726 VWA1 OR4F5 AGRN PLEKHN1 SKI LOC148413 FNDC10 TMEM52 CDK11A RNF223 LINC01128 HES4 ATAD3A LOC105378591 PRKCZ LOC105378589 NADK LOC729737 LOC100506504 TTLL10-AS1 ATAD3B OR4F16 CDK11B MIR200B MIR6859-2 LOC100133331 DVL1 LOC284600 LOC107985729 LOC100129534 LINC00115 LOC102724312 MXRA8 MIR1302-2 TNFRSF4 KLHL17 MMP23A LOC107985728 ATAD3C GABRD
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss DVL1 MIR6808 ACAP3 TAS1R3 MIR6727 MIR6726 CPSF3L PUSL1 CPTP
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss SCNN1D DVL1 MIR6808 ACAP3 TAS1R3 MIR6727 MIR6726 AURKAIP1 CPSF3L PUSL1 CPTP MXRA8
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss SCNN1D TAS1R3 TTLL10 MIR6726 UBE2J2 MIR200B LINC01342 DVL1 MIR6727 FAM132A MXRA8 TNFRSF18 MIR6808 ACAP3 SDF4 TNFRSF4 RNF223 PUSL1 MIR429 C1orf159 AURKAIP1 MIR200A TTLL10-AS1 CPSF3L CPTP B3GALT6
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion SCNN1D DVL1 MIR6808 ACAP3 TAS1R3 MIR6727 MIR6726 AURKAIP1 CPSF3L PUSL1 CPTP MXRA8
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication SCNN1D TAS1R3 TTLL10 MIR6726 UBE2J2 MIR200B AGRN LINC01342 MIR6727 FAM132A LOC100288175 TNFRSF18 ACAP3 LOC105378948 SDF4 TNFRSF4 RNF223 PUSL1 MIR429 C1orf159 MIR200A TTLL10-AS1 CPSF3L CPTP B3GALT6
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SCNN1D TMEM88B MIB2 PERM1 TAS1R3 MIR6726 UBE2J2 VWA1 AGRN LINC01342 PLEKHN1 LOC148413 FAM41C MIR6727 FAM132A MMP23B LOC100287934 ISG15 SAMD11 FNDC10 ACAP3 CDK11A LOC105378948 RNF223 LINC01128 PUSL1 MIR429 HES4 NOC2L C1orf159 ATAD3A CCNL2 NADK AURKAIP1 MIR200A TTLL10-AS1 ANKRD65 CPTP ATAD3B SLC35E2B CDK11B TTLL10 SSU72 MRPL20 MIR200B DVL1 LOC284600 LOC107985729 LINC00115 SLC35E2 LOC100288175 LOC102724312 MXRA8 TMEM240 TNFRSF18 MIR6808 LOC100130417 SDF4 TNFRSF4 KLHL17 LOC100288069 MMP23A LOC107985728 FAM87B ATAD3C CPSF3L B3GALT6
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain SCNN1D DVL1 MIR6808 ACAP3 TAS1R3 MIR6727 MIR6726 CPSF3L PUSL1 CPTP MXRA8
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ATAD3B SCNN1D TMEM88B MIB2 CDK11B TAS1R3 TTLL10 MIR6726 SSU72 MRPL20 UBE2J2 MIR200B VWA1 LINC01342 LOC148413 DVL1 MIR6727 LOC107985729 FAM132A MMP23B LOC102724312 MXRA8 TMEM240 TNFRSF18 MIR6808 FNDC10 ACAP3 SDF4 TNFRSF4 PUSL1 MIR429 C1orf159 ATAD3A ATAD3C CCNL2 AURKAIP1 MIR200A TTLL10-AS1 CPSF3L ANKRD65 CPTP B3GALT6
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss SCNN1D MIR6808 ACAP3 TAS1R3 MIR6726 UBE2J2 PUSL1 DVL1 MIR6727 AURKAIP1 CPSF3L CPTP MXRA8
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SCNN1D TMEM88B PERM1 TAS1R3 TTLL10 MIR6726 MRPL20 UBE2J2 MIR200B AGRN LINC01342 PLEKHN1 LOC148413 DVL1 MIR6727 LOC284600 FAM132A LOC100288175 MXRA8 ISG15 TNFRSF18 SAMD11 MIR6808 ACAP3 LOC100130417 LOC105378948 SDF4 TNFRSF4 RNF223 KLHL17 PUSL1 MIR429 HES4 NOC2L C1orf159 LOC107985728 CCNL2 AURKAIP1 MIR200A TTLL10-AS1 CPSF3L ANKRD65 CPTP B3GALT6
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain SCNN1D TNFRSF18 ACAP3 TTLL10 MIR6726 SDF4 UBE2J2 MIR200B TNFRSF4 PUSL1 MIR429 MIR6727 FAM132A MIR200A TTLL10-AS1 CPSF3L B3GALT6

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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