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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88891933 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00268517_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss TRAPPC2L LOC107987238 PABPN1L LOC101927793 PIEZO1 APRT CBFA2T3 CDT1 GALNS LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CDH15 LOC400558 TRAPPC2L LOC107987238 LOC101927793 PIEZO1 ACSF3 LOC339059 APRT CBFA2T3 CTU2 LOC100289580 PABPN1L CDT1 ZNF778 SLC22A31 GALNS LOC100129697 MIR4722 LOC105371409 LINC00304
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion PABPN1L LOC101927793 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CDH15 LOC400558 TRAPPC2L LOC107987238 LOC101927793 ACSF3 APRT CBFA2T3 PABPN1L CDT1 SLC22A31 GALNS LOC100129697 LOC105371409 LINC00304
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CDH15 LOC400558 TRAPPC2L LOC105371414 LOC107987238 LOC101927793 PIEZO1 ACSF3 LOC339059 APRT CBFA2T3 LOC100289580 PABPN1L CDT1 ZNF778 SLC22A31 ANKRD11 GALNS LOC100287036 LOC100129697 LOC105371409 LINC00304
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain TRAPPC2L LOC107987238 PABPN1L LOC101927793 PIEZO1 APRT CBFA2T3 CDT1 GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L LOC107987238 PABPN1L LOC101927793 APRT CBFA2T3 CDT1 GALNS LOC100129697 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDH15 LOC400558 TRAPPC2L LOC107987238 LOC101927793 ACSF3 APRT CBFA2T3 PABPN1L CDT1 GALNS LOC100129697 LOC105371409 LINC00304
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss TRAPPC2L LOC105371419 LOC105371414 AFG3L1P TUBB3 IL17C TUBB8P7 LOC100289580 PABPN1L CENPBD1 CYBA DBNDD1 LOC100129697 LOC101927817 LOC107987238 LOC101927793 PIEZO1 MC1R SPATA33 VPS9D1-AS1 APRT ZNF276 FANCA DPEP1 SPIRE2 ZNF778 CDH15 CHMP1A RPL13 LOC107984817 ACSF3 CBFA2T3 FAM157C CTU2 SNORD68 SPG7 RNF166 SLC22A31 PRDM7 ANKRD11 SPATA2L LOC100287036 MIR4722 LOC105371409 MVD LOC400558 LOC339059 CPNE7 SNAI3 DEF8 URAHP GAS8 SNAI3-AS1 CDK10 VPS9D1 CDT1 TCF25 GAS8-AS1 GALNS LINC00304
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain TRAPPC2L LOC107987238 LOC101927793 PIEZO1 LOC339059 APRT CBFA2T3 CTU2 LOC100289580 PABPN1L CDT1 GALNS LOC100129697 MIR4722 LOC105371409

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