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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88891933 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00268517_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
NM_175931.2 NP_787127.1
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AB010420.1 BAA29062.1
AK308355.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BE676580.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PABPN1L LOC100129697 PIEZO1 CBFA2T3 LOC107987238 LOC101927793 TRAPPC2L LOC105371409 GALNS CDT1 APRT
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain PABPN1L CTU2 LOC339059 PIEZO1 LOC107987238 LOC101927793 GALNS SLC22A31 CDT1 LINC00304 APRT ACSF3 LOC100129697 LOC100289580 CBFA2T3 ZNF778 TRAPPC2L LOC105371409 CDH15 LOC400558 MIR4722
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion PABPN1L CBFA2T3 LOC101927793
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss PABPN1L LOC107987238 LOC101927793 GALNS SLC22A31 CDT1 LINC00304 APRT ACSF3 LOC100129697 CBFA2T3 TRAPPC2L LOC105371409 CDH15 LOC400558
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain PABPN1L LOC339059 LOC105371414 PIEZO1 LOC107987238 LOC101927793 GALNS SLC22A31 CDT1 LINC00304 APRT ACSF3 LOC100129697 LOC100289580 CBFA2T3 ZNF778 TRAPPC2L LOC100287036 LOC105371409 CDH15 LOC400558 ANKRD11
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain PABPN1L PIEZO1 CBFA2T3 LOC107987238 LOC101927793 TRAPPC2L GALNS CDT1 APRT
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss PABPN1L LOC107987238 LOC101927793 GALNS CDT1 LINC00304 APRT ACSF3 LOC100129697 CBFA2T3 TRAPPC2L LOC105371409 CDH15 LOC400558
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L LOC100129697 CBFA2T3 LOC107987238 LOC101927793 TRAPPC2L LOC105371409 GALNS CDT1 APRT
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss TUBB8P7 IL17C GALNS SLC22A31 ACSF3 TCF25 MVD SPIRE2 SNAI3-AS1 DBNDD1 SNAI3 AFG3L1P ANKRD11 FAM157C CHMP1A DEF8 LOC105371414 LOC101927793 SPG7 VPS9D1-AS1 CDT1 LOC105371419 SNORD68 APRT FANCA DPEP1 LOC100129697 CDK10 ZNF778 ZNF276 LOC100287036 SPATA2L RNF166 LOC400558 MIR4722 LOC107984817 PABPN1L CTU2 LOC339059 RPL13 LOC101927817 VPS9D1 CENPBD1 LINC00304 TRAPPC2L TUBB3 LOC105371409 SPATA33 URAHP PRDM7 PIEZO1 LOC107987238 CPNE7 GAS8-AS1 GAS8 MC1R LOC100289580 CBFA2T3 CYBA CDH15
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain PABPN1L CTU2 LOC339059 PIEZO1 LOC107987238 LOC101927793 GALNS CDT1 APRT LOC100289580 CBFA2T3 TRAPPC2L MIR4722

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