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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:870186 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00295683_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 17 - Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625086 Chr.11:860117 - 882352 on Build GRCh38 Loss TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain LOC171391 TSPAN4 CRACR2B AP2A2 PIDD1 PANO1 SNORA52 PDDC1 CEND1 RPLP2 CD151 POLR2L SLC25A22 CHID1 PNPLA2
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss TSPAN4 POLR2L CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC171391 PHRF1 SIGIRR TMEM80 EPS8L2 TOLLIP TOLLIP-AS1 PIDD1 PANO1 PDDC1 ANO9 CEND1 TALDO1 RPLP2 MUC5AC HRAS MIR210 MUC6 RNH1 LOC101927503 PTDSS2 CHID1 MIR210HG PNPLA2 LRRC56 CDHR5 MUC2 TSPAN4 MUC5B CRACR2B AP2A2 SCT IRF7 SNORA52 DEAF1 RASSF7 CD151 POLR2L LOC101059906 LMNTD2 SLC25A22 DRD4 MIR6744 LOC143666
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC171391 PHRF1 SIGIRR TMEM80 EPS8L2 PIDD1 PANO1 PDDC1 ANO9 CEND1 TALDO1 RPLP2 HRAS MIR210 RNH1 PTDSS2 CHID1 MIR210HG PNPLA2 LRRC56 CDHR5 TSPAN4 B4GALNT4 CRACR2B AP2A2 SCT IRF7 SNORA52 DEAF1 RASSF7 CD151 PKP3 POLR2L LOC101059906 LMNTD2 SLC25A22 DRD4 LOC143666
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC2 TSPAN4 MUC5B TOLLIP AP2A2 TOLLIP-AS1 MUC5AC MUC6 LOC101927503 BRSK2 CHID1 MIR6744 MOB2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC171391 PHRF1 TMEM80 EPS8L2 PIDD1 PANO1 PDDC1 CEND1 TALDO1 RPLP2 HRAS MIR210 RNH1 PTDSS2 CHID1 MIR210HG PNPLA2 LRRC56 CDHR5 TSPAN4 CRACR2B SCT IRF7 SNORA52 DEAF1 RASSF7 CD151 POLR2L LOC101059906 LMNTD2 SLC25A22 DRD4 LOC143666
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss LOC171391 TSPAN4 CRACR2B PIDD1 PANO1 SNORA52 PDDC1 CEND1 RPLP2 CD151 POLR2L SLC25A22 CHID1 PNPLA2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC171391 PHRF1 SIGIRR TMEM80 EPS8L2 TOLLIP PIDD1 PANO1 PDDC1 ANO9 CEND1 TALDO1 RPLP2 MUC5AC HRAS MIR210 MUC6 RNH1 LOC101927503 PTDSS2 CHID1 MIR210HG PNPLA2 LRRC56 CDHR5 MUC2 TSPAN4 B4GALNT4 MUC5B CRACR2B AP2A2 SCT IRF7 SNORA52 DEAF1 RASSF7 CD151 PKP3 POLR2L LOC101059906 LMNTD2 SLC25A22 DRD4 MIR6744 LOC143666
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 MUC6 AP2A2 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC2 TSPAN4 MUC5B TOLLIP AP2A2 TOLLIP-AS1 MUC5AC MUC6 LOC101927503 BRSK2 CHID1 MIR6744 MOB2
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 TSPAN4 CD151 POLR2L CRACR2B AP2A2 PIDD1 CHID1 PNPLA2 SNORA52
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss LOC171391 TSPAN4 CRACR2B PIDD1 PANO1 SNORA52 PDDC1 CEND1 RPLP2 CD151 POLR2L SLC25A22 CHID1 PNPLA2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 CD151 POLR2L CRACR2B CHID1 PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion LOC171391 TSPAN4 CRACR2B PIDD1 PANO1 SNORA52 PDDC1 CEND1 TALDO1 RPLP2 CD151 POLR2L SLC25A22 CHID1 PNPLA2

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