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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:870186 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00295683_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 17 - Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain RPLP2 CD151 POLR2L AP2A2 PANO1 PIDD1 SLC25A22 PNPLA2 PDDC1 TSPAN4 LOC171391 SNORA52 CRACR2B CHID1 CEND1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC5B RNH1 RPLP2 CD151 POLR2L AP2A2 MUC5AC LOC143666 MUC2 PTDSS2 SLC25A22 DRD4 SIGIRR TOLLIP-AS1 TMEM80 LMNTD2 TSPAN4 LOC171391 HRAS MUC6 MIR6744 SCT ANO9 CEND1 CDHR5 MIR210 LRRC56 PANO1 PHRF1 PIDD1 TALDO1 IRF7 EPS8L2 PNPLA2 LOC101059906 PDDC1 SNORA52 CRACR2B CHID1 DEAF1 RASSF7 TOLLIP MIR210HG LOC101927503
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L TSPAN4 CHID1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion B4GALNT4 RNH1 RPLP2 CD151 POLR2L AP2A2 LOC143666 PTDSS2 SLC25A22 DRD4 SIGIRR TMEM80 LMNTD2 TSPAN4 PKP3 LOC171391 HRAS SCT ANO9 CEND1 CDHR5 MIR210 LRRC56 PANO1 PHRF1 PIDD1 TALDO1 IRF7 EPS8L2 PNPLA2 LOC101059906 PDDC1 SNORA52 CRACR2B CHID1 DEAF1 RASSF7 MIR210HG
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion BRSK2 MUC5B MOB2 AP2A2 MUC5AC MUC2 TOLLIP-AS1 TSPAN4 MUC6 CHID1 MIR6744 TOLLIP LOC101927503
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion RNH1 RPLP2 CD151 POLR2L LOC143666 PTDSS2 SLC25A22 DRD4 TMEM80 LMNTD2 TSPAN4 LOC171391 HRAS SCT CEND1 CDHR5 MIR210 LRRC56 PANO1 PHRF1 PIDD1 TALDO1 IRF7 EPS8L2 PNPLA2 LOC101059906 PDDC1 SNORA52 CRACR2B CHID1 DEAF1 RASSF7 MIR210HG
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss RPLP2 CD151 POLR2L PANO1 PIDD1 SLC25A22 PNPLA2 PDDC1 TSPAN4 LOC171391 SNORA52 CRACR2B CHID1 CEND1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC5B B4GALNT4 RNH1 RPLP2 CD151 POLR2L AP2A2 MUC5AC LOC143666 MUC2 PTDSS2 SLC25A22 DRD4 SIGIRR TMEM80 LMNTD2 TSPAN4 PKP3 LOC171391 HRAS MUC6 MIR6744 SCT ANO9 CEND1 CDHR5 MIR210 LRRC56 PANO1 PHRF1 PIDD1 TALDO1 IRF7 EPS8L2 PNPLA2 LOC101059906 PDDC1 SNORA52 CRACR2B CHID1 DEAF1 RASSF7 TOLLIP MIR210HG LOC101927503
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain AP2A2 TSPAN4 MUC6 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion BRSK2 MUC5B MOB2 AP2A2 MUC5AC MUC2 TOLLIP-AS1 TSPAN4 MUC6 CHID1 MIR6744 TOLLIP LOC101927503
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 PNPLA2 CD151 POLR2L AP2A2 TSPAN4 SNORA52 CRACR2B CHID1 PIDD1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss RPLP2 CD151 POLR2L PANO1 PIDD1 SLC25A22 PNPLA2 PDDC1 TSPAN4 LOC171391 SNORA52 CRACR2B CHID1 CEND1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 CD151 POLR2L TSPAN4 CRACR2B CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion RPLP2 CD151 POLR2L PANO1 PIDD1 TALDO1 SLC25A22 PNPLA2 PDDC1 TSPAN4 LOC171391 SNORA52 CRACR2B CHID1 CEND1

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