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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2055470 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00307045_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion LOC105378591 PRKCZ GABRD
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss FAM87B TMEM88B LOC100288175 LOC101928626 WASH7P LINC01128 MIR429 MTND1P23 MORN1 TAS1R3 RNF223 ACAP3 LOC100133331 B3GALT6 DVL1 NADK AURKAIP1 SAMD11 PRKCZ LOC105378589 MIR1302-2 SDF4 LOC105378592 FAAP20 LOC100287934 LOC102725121 VWA1 HES4 MIB2 PUSL1 LINC01342 CFAP74 LOC148413 LOC100130417 LOC100132287 TTLL10-AS1 OR4F29 FNDC10 FAM138A CPTP C1orf159 SLC35E2 MMP23B LINC00115 LOC100134822 CALML6 OR4F5 LOC105378948 ISG15 CDK11A SKI ATAD3A LOC105378947 TNFRSF18 CDK11B TTLL10 MIR6859-2 LOC107985729 LOC100129534 FAM132A LOC107985728 MXRA8 MIR200B PERM1 SSU72 SCNN1D LOC100506504 GNB1 TMEM52 LOC107984841 UBE2J2 MTND2P28 LOC102724312 LOC284600 LOC729737 MMP23A CCNL2 ATAD3B LOC105378591 MIR200A SLC35E2B ANKRD65 OR4F16 MIR6727 TMEM240 MIR6859-1 MIR6726 FAM41C MIR6808 CPSF3L MIR6723 LOC100288069 TNFRSF4 LOC105378949 NOC2L PLEKHN1 ATAD3C AGRN DDX11L1 GABRD KLHL17 MRPL20
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss CFAP74 LOC105378591 PRKCZ LOC105378589 GABRD
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss ATAD3B LOC105378591 LOC107985729 VWA1 SLC35E2B ANKRD65 TMEM88B MIB2 TMEM240 CFAP74 LOC148413 SSU72 FNDC10 SLC35E2 MMP23B GNB1 CALML6 LOC105378949 TMEM52 NADK CDK11A LOC102724312 ATAD3C ATAD3A PRKCZ LOC105378589 MMP23A CDK11B CCNL2 GABRD MRPL20

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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