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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1294183 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00307494_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 22 - Exon 23
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 AAH04874.2
BC021851.1 AAH21851.1
BC029929.1 AAH29929.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3 UBE2J2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR200A MIR6859-2 DVL1 LOC284600 LOC105378949 MIR200B PERM1 LOC107985728 PRKCZ SLC35E2B NADK LOC148413 TNFRSF4 OR4F5 LINC01128 LOC100132287 ATAD3A HES4 LOC100129534 MRPL20 C1orf159 LINC01342 LOC105378589 LOC102725121 MMP23B MORN1 SLC35E2 LOC100287934 PLEKHN1 MIR1302-2 WASH7P LOC100288175 GABRD MTND2P28 DDX11L1 OR4F29 LOC100130417 MIR6808 TNFRSF18 MIR429 CPSF3L VWA1 ISG15 FAM41C MIB2 LOC100134822 PUSL1 SSU72 CPTP MMP23A TMEM88B KLHL17 LOC105378592 ACAP3 CDK11B TMEM240 TMEM52 FAAP20 LOC102724312 FAM87B GNB1 NOC2L LOC100133331 SAMD11 RNF223 CFAP74 FNDC10 TTLL10-AS1 LINC00115 LOC101928626 LOC107985729 MIR6726 CDK11A AURKAIP1 SDF4 TAS1R3 LOC729737 LOC105378591 ATAD3C LOC100506504 AGRN CALML6 TTLL10 MIR6723 UBE2J2 MIR6859-1 FAM132A LOC107984841 MXRA8 CCNL2 MTND1P23 SCNN1D OR4F16 MIR6727 LOC100288069 LOC105378947 SKI B3GALT6 ATAD3B ANKRD65 LOC105378948 FAM138A
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 FAM132A ACAP3 SDF4 B3GALT6 UBE2J2
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss DVL1 CPTP MIR6808 MIR6726 MIR6727 PUSL1 ACAP3 TAS1R3 CPSF3L
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss MIR200A MIR6726 FAM132A MIR200B SDF4 RNF223 TTLL10-AS1 C1orf159 LINC01342 SCNN1D TNFRSF18 MIR429 TTLL10 ACAP3 TNFRSF4 B3GALT6 UBE2J2
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR200A MIR6726 PUSL1 LOC100288175 MIR200B SDF4 TAS1R3 CPTP AGRN TTLL10 ACAP3 TNFRSF4 UBE2J2 FAM132A RNF223 TTLL10-AS1 C1orf159 LINC01342 SCNN1D MIR6727 TNFRSF18 MIR429 B3GALT6 LOC105378948 CPSF3L
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion DVL1 CPTP MIR6808 SCNN1D MIR6726 MIR6727 PUSL1 AURKAIP1 ACAP3 MXRA8 TAS1R3 CPSF3L
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR200A DVL1 VWA1 ISG15 FAM41C MIB2 LOC284600 PUSL1 MIR200B PERM1 LOC107985728 SSU72 SLC35E2B CPTP NADK MMP23A LOC148413 TMEM88B KLHL17 ACAP3 TNFRSF4 CDK11B TMEM240 LINC01128 LOC102724312 FAM87B NOC2L SAMD11 ATAD3A RNF223 HES4 FNDC10 TTLL10-AS1 MRPL20 C1orf159 LINC01342 LINC00115 MMP23B LOC107985729 SLC35E2 LOC100287934 PLEKHN1 MIR6726 CDK11A LOC100288175 AURKAIP1 SDF4 TAS1R3 ATAD3C AGRN TTLL10 UBE2J2 FAM132A LOC100130417 MXRA8 CCNL2 MIR6808 SCNN1D MIR6727 TNFRSF18 MIR429 LOC100288069 B3GALT6 ATAD3B ANKRD65 LOC105378948 CPSF3L
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR200A DVL1 VWA1 MIB2 MIR6726 PUSL1 AURKAIP1 MIR200B SDF4 TAS1R3 SSU72 CPTP LOC148413 TMEM88B ATAD3C TTLL10 ACAP3 TNFRSF4 UBE2J2 CDK11B TMEM240 LOC102724312 FAM132A MXRA8 ATAD3A FNDC10 TTLL10-AS1 MRPL20 CCNL2 C1orf159 LINC01342 MIR6808 SCNN1D MIR6727 MMP23B TNFRSF18 MIR429 LOC107985729 B3GALT6 ATAD3B ANKRD65 CPSF3L
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain DVL1 CPTP MIR6808 SCNN1D MIR6726 MIR6727 PUSL1 ACAP3 MXRA8 TAS1R3 CPSF3L
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss DVL1 MIR6726 PUSL1 AURKAIP1 MXRA8 TAS1R3 CPTP MIR6808 SCNN1D MIR6727 ACAP3 UBE2J2 CPSF3L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR200A DVL1 PLEKHN1 ISG15 LOC284600 MIR6726 PUSL1 LOC100288175 AURKAIP1 MIR200B SDF4 PERM1 LOC107985728 TAS1R3 CPTP LOC148413 TMEM88B KLHL17 AGRN TTLL10 ACAP3 TNFRSF4 UBE2J2 NOC2L FAM132A SAMD11 LOC100130417 MXRA8 RNF223 HES4 TTLL10-AS1 MRPL20 CCNL2 C1orf159 LINC01342 MIR6808 SCNN1D MIR6727 TNFRSF18 MIR429 B3GALT6 ANKRD65 LOC105378948 CPSF3L
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR200A MIR6726 PUSL1 FAM132A MIR200B SDF4 TTLL10-AS1 SCNN1D MIR6727 TNFRSF18 MIR429 TTLL10 ACAP3 TNFRSF4 B3GALT6 UBE2J2 CPSF3L

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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