Hs00309155_cn

• Gene Symbol: RRP1
• Assay Reference Genome Location: Chr.21:43789713 on build GRCh38
• Cytoband: 21q22.3

Target Gene Details

• Entrez Gene ID: 8568
• Gene Name: ribosomal RNA processing 1
• Gene Aliases: D21S2056E, NNP-1, NOP52, RRP1A
• Location: Chr.21:43789537-43804102 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RRP1	NM_003683.5	1	177	NP_003674.1
	XM_017028485.1	1	168	XP_016883974.1
	XM_017028486.1	1	163	XP_016883975.1
	AK223185.1	1	138	BAD96905.1
	AK223215.1	1	134	BAD96935.1
	AK303000.1	1	137
	AK313116.1	1	134
	BC000380.2	1	124	AAH00380.1
	BC014787.1	1	99	AAH14787.2
	DA275615.1	1	179
	U79775.1	1	122	AAC51625.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv509799	Chr.21:43724009 - 43852846 on Build GRCh38	Insertion	LOC105372824 CSTB RRP1 AATBC PDXK
nsv834108	Chr.21:43758156 - 43949760 on Build GRCh38	Loss	CSTB AGPAT3 RRP1 AATBC PDXK
nsv834107	Chr.21:43735444 - 43874665 on Build GRCh38	Loss	LOC105372824 CSTB AGPAT3 RRP1 AATBC PDXK
nsv953642	Chr.21:43731220 - 43827719 on Build GRCh38	Deletion	LOC105372824 CSTB RRP1 AATBC PDXK
nsv470904	Chr.21:43731164 - 43838166 on Build GRCh38	Loss	LOC105372824 CSTB RRP1 AATBC PDXK
nsv520305	Chr.21:43756077 - 43826445 on Build GRCh38	Loss	CSTB RRP1 AATBC PDXK
esv33817	Chr.21:43749531 - 44647625 on Build GRCh38	Loss	AIRE KRTAP10-7 KRTAP10-5 KRTAP10-1 RRP1 KRTAP10-3 KRTAP10-2 TSPEAR C21orf2 KRTAP10-6 ICOSLG TSPEAR-AS1 KRTAP10-11 LOC100505727 KRTAP10-9 TSPEAR-AS2 PWP2 PFKL TRAPPC10 KRTAP10-10 TRPM2 LOC105372833 TRPM2-AS DNMT3L LRRC3-AS1 C21orf33 CSTB AGPAT3 AATBC KRTAP10-4 LRRC3 KRTAP10-8 PDXK

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

rRNA processing

Function(s)

poly(A) RNA binding