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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49662228 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00313696_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 6 955 NP_001184051.1
NM_001197123.1 6 1013 NP_001184052.1
NM_001197124.1 NP_001184053.1
NM_001197125.1 5 782 NP_001184054.1
NM_001197126.1 4 610 NP_001184055.1
NM_001197127.1 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 6 955 NP_001562.1
NR_045568.1 6 1102
XM_006723197.1 6 933 XP_006723260.1
XM_006723198.1 6 869 XP_006723261.1
XM_006723200.1 5 618 XP_006723263.1
XM_006723201.1 5 691 XP_006723264.1
XM_006723202.2 6 840 XP_006723265.1
XM_017026766.1 6 924 XP_016882255.1
XM_017026767.1 6 869 XP_016882256.1
AB102886.1 BAD89415.1
AB102887.1 BAD89416.1
AK057577.1 5 1721
AK292027.1 6 1084
AK314421.1 6 868
BC000660.2 6 857 AAH00660.1
BC009395.2 6 882 AAH09395.1
BC071721.1 5 1044 AAH71721.1
BP347627.1
BU859806.1 1 105
HM357932.1 6 843
HM357933.1
HM357934.1 4 440
HM357935.1
HM357936.1
HM357937.1 5 612
Z56281.1 6 748 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRMT1 MIR5088 PRRG2 NOSIP IRF3 ADM5 RRAS PRR12 BCL2L12 CPT1C SCAF1
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRMT1 MIR5088 PRRG2 NOSIP IRF3 ADM5 RRAS PRR12 BCL2L12 CPT1C SCAF1
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss RPL18 SNAR-C4 TSKS SLC6A16 CABP5 MIR6798 FTL IZUMO1 DKKL1 PRMT1 RPS11 BSPH1 NTF4 SNAR-A12 FGF21 FUT2 CCDC114 NTN5 PTOV1 SIGLEC11 MIR4751 TMEM143 IL4I1 CARD8 CPT1C SCAF1 SNAR-A13 SPACA4 VRK3 NUCB1-AS1 KCNA7 SNAR-A10 MIR150 SNAR-A3 CCDC155 PTH2 CGB2 SNAR-C5 CARD8-AS1 SNRNP70 BAX SNAR-A4 MIR6799 HSD17B14 PPP1R15A LMTK3 ZNF473 C19orf73 CGB8 LHB PRRG2 IRF3 SIGLEC16 SNORD32A DHDH KCNJ14 FUT1 CGB5 PTOV1-AS2 CYTH2 ELSPBP1 FLJ26850 RRAS RUVBL2 SNORD35A PPFIA3 SNAR-G2 CGB7 SNAR-A1 LOC100287477 RASIP1 MAMSTR SULT2B1 TULP2 MIR6800 CD37 SNAR-B2 NUP62 FAM83E SNORD35B SNAR-C3 TEAD2 KDELR1 PNKP RPL13A MIR4324 PLEKHA4 LIN7B GYS1 CGB3 LIG1 MED25 CGB1 GFY RCN3 LOC101928295 AP2A1 LOC101059948 DBP SNAR-B1 SNAR-A9 SNAR-C2 SNAR-A7 SYNGR4 SNAR-A2 EMP3 LOC105447645 TRPM4 C19orf68 NUCB1 ALDH16A1 FLT3LG SPHK2 HRC SNAR-C1 SNAR-D ATF5 PIH1D1 TBC1D17 FCGRT MIR4749 SNAR-A6 SLC17A7 ADM5 SNAR-A5 BCL2L12 FUZ SEC1P SNAR-A11 MIR5088 PLA2G4C-AS1 PLA2G4C NOSIP AKT1S1 PRR12 GRIN2D ZNF114 MIR4750 SNORD33 GRWD1 BCAT2 SNAR-G1 PTOV1-AS1 SNAR-A14 LOC105372430 CA11 SNORD34 SNAR-A8
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain MIR5088 TSKS PTOV1-AS2 RRAS MIR6799 PRR12 CPT1C SCAF1 PRMT1 MIR4749 PTOV1-AS1 IRF3 ADM5 MED25 AP2A1 BCL2L12 FUZ MIR6800 PTOV1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRMT1 MIR5088 PRRG2 NOSIP IRF3 ADM5 RRAS PRR12 BCL2L12 CPT1C SCAF1
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion NUP62 TSKS PNKP MIR6799 ATF5 PRMT1 TBC1D17 MIR4749 PRRG2 IRF3 ADM5 MED25 AP2A1 BCL2L12 FUZ PTOV1 MIR5088 NOSIP MIR4751 PTOV1-AS2 RRAS AKT1S1 IL4I1 PRR12 CPT1C SCAF1 MIR4750 PTOV1-AS1 MIR6800
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD35B TSKS RPL13A MIR6799 PRMT1 RPS11 FCGRT PRRG2 IRF3 ADM5 SNORD32A MED25 RCN3 AP2A1 BCL2L12 FUZ MIR5088 NOSIP RRAS SNORD35A PRR12 CPT1C SCAF1 SNORD33 PTOV1-AS1 MIR6800 SNORD34 MIR150
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRMT1 PRRG2 NOSIP IRF3 RRAS PRR12 BCL2L12 SCAF1
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss IRF3 SCAF1

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