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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49662228 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00313696_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 6 955 NP_001184051.1
NM_001197123.1 6 1013 NP_001184052.1
NM_001197124.1 NP_001184053.1
NM_001197125.1 5 782 NP_001184054.1
NM_001197126.1 4 610 NP_001184055.1
NM_001197127.1 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 6 955 NP_001562.1
NR_045568.1 6 1102
XM_006723197.1 6 933 XP_006723260.1
XM_006723198.1 6 869 XP_006723261.1
XM_006723200.1 5 618 XP_006723263.1
XM_006723201.1 5 691 XP_006723264.1
XM_006723202.2 6 840 XP_006723265.1
XM_017026766.1 6 924 XP_016882255.1
XM_017026767.1 6 869 XP_016882256.1
AB102886.1 BAD89415.1
AB102887.1 BAD89416.1
AK057577.1 5 1721
AK292027.1 6 1084
AK314421.1 6 868
BC000660.2 6 857 AAH00660.1
BC009395.2 6 882 AAH09395.1
BC071721.1 5 1044 AAH71721.1
BP347627.1
BU859806.1 1 105
HM357932.1 6 843
HM357933.1
HM357934.1 4 440
HM357935.1
HM357936.1
HM357937.1 5 612
Z56281.1 6 748 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRRG2 ADM5 SCAF1 BCL2L12 IRF3 PRR12 NOSIP RRAS PRMT1 CPT1C MIR5088
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRRG2 ADM5 SCAF1 BCL2L12 IRF3 PRR12 NOSIP RRAS PRMT1 CPT1C MIR5088
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss KCNJ14 LOC105447645 BCAT2 PNKP LMTK3 CGB7 PTOV1-AS1 MIR6798 SNAR-A7 MIR4750 PLEKHA4 CA11 PRR12 SNAR-A3 SULT2B1 MIR4751 SNAR-B2 IZUMO1 LHB CGB8 SEC1P SIGLEC11 AKT1S1 IL4I1 RCN3 RPL18 NUCB1 LIG1 SNORD34 IRF3 NTN5 CGB5 PPFIA3 ZNF114 FTL SNORD35A ATF5 SNAR-A14 RUVBL2 ELSPBP1 MIR4324 NUCB1-AS1 TRPM4 SNORD35B SNAR-C4 TSKS SNAR-A11 CCDC155 FGF21 SNAR-G1 TMEM143 PTOV1 SNAR-C2 MIR4749 LOC101059948 SNAR-B1 SNAR-A6 SNAR-A2 C19orf73 FCGRT BCL2L12 NOSIP SPHK2 PIH1D1 DKKL1 MIR6800 LOC100287477 FLT3LG SCAF1 SIGLEC16 GFY CYTH2 CPT1C VRK3 MIR5088 SNRNP70 CD37 LOC101928295 MED25 ADM5 TULP2 SNAR-C5 SPACA4 NUP62 DBP RRAS PRMT1 SYNGR4 FLJ26850 ZNF473 GRWD1 PLA2G4C-AS1 HRC SNAR-A12 SNAR-C3 SNAR-A10 TBC1D17 PTOV1-AS2 FUT1 SNAR-A4 GRIN2D CCDC114 PPP1R15A PLA2G4C MAMSTR MIR6799 SNAR-A8 KDELR1 SNAR-C1 CGB2 RASIP1 NTF4 FUZ SNAR-D PRRG2 SNORD33 SLC6A16 SNAR-A5 BSPH1 SNAR-A13 AP2A1 SNAR-G2 CGB1 GYS1 CABP5 DHDH RPS11 MIR150 KCNA7 SLC17A7 CGB3 LIN7B PTH2 BAX CARD8-AS1 SNAR-A9 C19orf68 FAM83E RPL13A LOC105372430 TEAD2 EMP3 ALDH16A1 SNORD32A FUT2 HSD17B14 CARD8 SNAR-A1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 SCAF1 BCL2L12 IRF3 PRR12 RRAS PRMT1 CPT1C MIR5088
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6800 ATF5 SCAF1 PNKP PTOV1-AS1 FUZ MIR4750 CPT1C MIR5088 PRRG2 MED25 ADM5 PRR12 AP2A1 NUP62 RRAS PRMT1 MIR4751 TSKS PTOV1 AKT1S1 MIR4749 IL4I1 TBC1D17 PTOV1-AS2 BCL2L12 IRF3 NOSIP MIR6799
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRRG2 ADM5 SCAF1 BCL2L12 IRF3 PRR12 NOSIP RRAS PRMT1 CPT1C MIR5088
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR6800 SCAF1 PTOV1-AS1 FUZ CPT1C MIR5088 PRRG2 MED25 SNORD33 ADM5 PRR12 AP2A1 SNORD35B RRAS PRMT1 TSKS RPS11 MIR150 RPL13A RCN3 FCGRT BCL2L12 SNORD34 IRF3 NOSIP SNORD32A SNORD35A MIR6799
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRRG2 SCAF1 BCL2L12 IRF3 PRR12 NOSIP RRAS PRMT1
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss SCAF1 IRF3

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