Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 10 - Intron 11 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| BG189223.1 | ||||
| BQ446114.1 | ||||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 MIR935
TARM1
CACNG6
VSTM1
CACNG8
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
OSCAR
TARM1
NDUFA3
PRPF31
TFPT
VSTM1
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
MIR935
CACNG7
CACNG6
VSTM1
CACNG8
|
| nsv1057516 | Chr.19:53986233 - 54046901 on Build GRCh38 | Gain |
CACNG6
VSTM1
CACNG8
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MIR523
MIR527
MIR1283-1
MIR518B
MIR526A1
MIR4752
NLRP12
MIR520D
LOC105372457
NDUFA3
MYADM
TPM3P9
ZNF677
MIR520C
MIR517C
MIR522
LILRB2
TSEN34
MIR519D
MBOAT7
MIR518C
MIR526A2
MIR518D
MIR512-1
MIR517A
MIR373
MIR519B
MIR520B
MIR518E
RPS9
MIR516B2
LILRB5
MIR516A2
MIR371B
MIR518F
MIR516B1
MIR520A
MIR521-2
MIR518A2
MIR1283-2
ZNF845
LOC284379
BIRC8
MIR516A1
CACNG6
LILRA6
MIR526B
CNOT3
ZNF813
TMC4
TARM1
MIR1323
MIR517B
MIR520F
FAM90A27P
MIR519C
VN1R2
MIR512-2
MIR518A1
ZNF761
MIR371A
MIR520H
LILRA5
VN1R4
DPRX
MIR935
PRKCG
ZNF525
MIR521-1
LENG1
MIR520G
PRPF31
MIR520E
VSTM1
MIR525
OSCAR
MIR519A2
CACNG7
ZNF818P
MIR372
MIR515-2
MIR519A1
ZNF665
ZNF765
MIR515-1
TFPT
LILRB3
ZNF331
MIR519E
MIR524
CACNG8
MIR498
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
MIR935
OSCAR
TARM1
NDUFA3
PRPF31
CACNG6
TFPT
VSTM1
CACNG8
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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