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See other SNRNP200 CNV Assays ›
Gene Symbol
SNRNP200
Assay Reference Genome
Location

Chr.2:96274691 on build GRCh38
Cytoband
2q11.2
Assay ID Hs00329062_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 23020

Gene Name:

 small nuclear ribonucleoprotein U5 subunit 200

Gene Aliases:

 ASCC3L1, BRR2, HELIC2, RP33, U5-200KD

Location:

 Chr.2:96274336-96321893 on Build GRCh38

Assay Gene Location:

 Within Exon 47
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNRNP200 NM_014014.4 45 6864 NP_054733.2
XM_017003603.1 XP_016859092.1
AB018331.2 43 6402 BAA34508.2
AF085356.1 AAD40191.1
AF119874.1 AAF69628.1
AK023840.1 BAB14698.1
AK026662.1
AK090671.1 BAC03499.1
AL831994.1
AY572488.1 AAS78571.1
BC001417.2 AAH01417.4
BC007577.1 AAH07577.1
BC065924.1 AAH65924.1
BC112891.1
BC131784.1 15 2396

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834305 Chr.2:96183160 - 96353738 on Build GRCh38 Gain SNRNP200 CIAO1 STARD7-AS1 STARD7 LOC105373495 TMEM127 NCAPH ITPRIPL1
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion LOC107984110 MIR3127 SEMA4C LOC101927053 ANKRD39 LOC105373495 LOC100506123 FAM178B ITPRIPL1 ARID5A CIAO1 LOC100506076 LMAN2L LOC653924 STARD7 ADRA2B NEURL3 FAHD2CP SNRNP200 ANKRD36B ANKRD23 ANKRD36C CNNM3 FAHD2B FER1L5 ASTL NCAPH KANSL3 ANKRD36 STARD7-AS1 DUSP2 CNNM4 GPAT2 TMEM127 LOC105373496
nsv508155 Chr.2:96268957 - 96472565 on Build GRCh38 Deletion SNRNP200 CIAO1 LOC105373495 NCAPH ITPRIPL1
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion LOC107984110 MIR3127 SEMA4C LOC101927053 ANKRD39 LOC105373495 LOC100506123 FAM178B ITPRIPL1 ARID5A CIAO1 LOC100506076 LMAN2L LOC653924 STARD7 ADRA2B NEURL3 FAHD2CP SNRNP200 ANKRD36B ANKRD23 ANKRD36C CNNM3 FAHD2B FER1L5 ASTL NCAPH KANSL3 ANKRD36 STARD7-AS1 DUSP2 CNNM4 GPAT2 TMEM127 LOC105373496
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication LOC107984110 MIR3127 SEMA4C LOC101927053 ANKRD39 LOC105373495 LOC100506123 FAM178B ITPRIPL1 ARID5A CIAO1 LOC100506076 LMAN2L LOC653924 STARD7 ADRA2B NEURL3 FAHD2CP SNRNP200 ANKRD36B ANKRD23 ANKRD36C CNNM3 FAHD2B FER1L5 ASTL NCAPH KANSL3 ANKRD36 STARD7-AS1 DUSP2 CNNM4 GPAT2 TMEM127 LOC105373496

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