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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2073783 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00336426_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_001033581.1 1 137 NP_001028753.1
NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_011541776.1 1 150 XP_011540078.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001792.1 1 150 XP_016857281.1
XM_017001796.1 1 150 XP_016857285.1
XM_017001802.1 1 150 XP_016857291.1
XM_017001803.1 XP_016857292.1
XM_017001804.1 1 60 XP_016857293.1
AK290995.1
AK294649.1 1 139
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
CB152283.1 1 137
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion LOC105378591 GABRD PRKCZ
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss PLEKHN1 LOC148413 GNB1 ANKRD65 DDX11L1 SCNN1D OR4F16 MIR1302-2 OR4F5 ACAP3 ATAD3A MIB2 AURKAIP1 SAMD11 TNFRSF4 C1orf159 LOC100130417 TTLL10-AS1 UBE2J2 TTLL10 ATAD3C LOC105378948 LOC100133331 LOC102725121 ATAD3B MIR6859-1 OR4F29 LOC729737 SDF4 LOC100134822 LOC102724312 NADK SLC35E2B CPTP TMEM88B MTND2P28 LOC284600 TAS1R3 TMEM52 HES4 FNDC10 SLC35E2 LOC100288069 LINC01342 LOC100506504 WASH7P GABRD LOC105378949 TNFRSF18 LINC01128 MIR6859-2 FAM41C VWA1 RNF223 LOC100287934 LOC101928626 AGRN MIR6723 LOC105378589 PUSL1 MIR200B MMP23A MTND1P23 KLHL17 B3GALT6 FAM132A LOC107985728 LOC100132287 MXRA8 FAAP20 ISG15 LOC105378947 CPSF3L MIR6808 LOC107985729 MIR6727 CCNL2 LOC107984841 SKI CDK11A CALML6 CDK11B LOC100288175 MIR429 MRPL20 LINC00115 DVL1 LOC105378592 MIR200A PRKCZ NOC2L TMEM240 LOC100129534 CFAP74 MMP23B MORN1 SSU72 MIR6726 FAM138A LOC105378591 PERM1 FAM87B
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss LOC105378589 LOC105378591 CFAP74 GABRD PRKCZ
nsv2520 Chr.1:2063294 - 2089621 on Build GRCh38 Insertion PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss ATAD3B LOC148413 CDK11A GNB1 CALML6 CDK11B ANKRD65 VWA1 LOC105378589 LOC102724312 MMP23A MRPL20 NADK SLC35E2B ATAD3A MIB2 TMEM88B PRKCZ TMEM240 CFAP74 TMEM52 MMP23B FNDC10 SLC35E2 SSU72 ATAD3C LOC105378591 LOC107985729 CCNL2 GABRD LOC105378949
nsv509479 Chr.1:2072311 - 2176998 on Build GRCh38 Insertion PRKCZ

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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