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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186695 on build GRCh38
Cytoband
1q21.1
Assay ID Hs00338734_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 2063 NP_001138302.1
NM_001461.3 9 2196 NP_001452.2
XM_005272946.4 9 2170 XP_005273003.1
XM_005272947.4 9 1914 XP_005273004.1
XM_005272948.4 9 1897 XP_005273005.1
XM_006711245.3 8 1833 XP_006711308.1
XM_011509350.2 9 2201 XP_011507652.1
XM_011509351.2 8 1933 XP_011507653.1
XM_017000801.1 8 1945 XP_016856290.1
XM_017000802.1 8 1715 XP_016856291.1
AK222728.1 9 1911 BAD96448.1
AK225739.1
BC035687.1 7 1736 AAH35687.1
L37080.1 9 1882 AAA67849.1
Z47553.1 9 1888 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NBPF14 GNRHR2 PDIA3P1 PPIAL4G HFE2 PIAS3 GJA8 PEX11B ITGA10 ANKRD35 LOC284561 LOC100132057 NBPF12 NBPF10 RNF115 CH17-408M7.1 RNU1-13P PDZK1P1 NUDT4P1 PRKAB2 LOC105371226 PDE4DIP LOC100505824 HYDIN2 RNVU1-3 NUDT4P2 FMO5 CHD1L POLR3C LINC01138 NUDT17 LOC728989 MIR6077 GPR89A LOC101927468 CD160 LIX1L NBPF11 LINC00624 GJA5 ANKRD34A LOC100996517 NBPF13P GPR89B TXNIP ACP6 RNVU1-8 MIR5087 PDZK1 BCL9 NOTCH2NL LOC100996763 LOC101928979 RNVU1-1 RBM8A LOC105371242 MIR6736 POLR3GL RNVU1-6 RNVU1-7
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain NBPF14 PDIA3P1 NBPF11 PPIAL4G LINC00624 GJA5 GJA8 LOC100996517 NBPF13P GPR89B ACP6 LOC284561 RNVU1-8 LOC100132057 NBPF12 NBPF10 CH17-408M7.1 MIR5087 RNU1-13P PDZK1P1 BCL9 NUDT4P1 PRKAB2 LOC105371226 NOTCH2NL LOC100996763 PDE4DIP LOC101928979 RNVU1-1 LOC100505824 HYDIN2 RNVU1-3 LOC105371242 NUDT4P2 FMO5 CHD1L LINC01138 LOC728989 MIR6077 LOC101927468 RNVU1-6 RNVU1-7
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss NBPF14 PDIA3P1 NBPF11 PPIAL4G LINC00624 GJA5 GJA8 LOC100996517 NBPF13P GPR89B ACP6 LOC284561 RNVU1-8 LOC100132057 NBPF12 NBPF10 CH17-408M7.1 MIR5087 RNU1-13P PDZK1P1 BCL9 NUDT4P1 PRKAB2 LOC105371226 NOTCH2NL LOC100996763 PDE4DIP RNVU1-1 LOC100505824 HYDIN2 RNVU1-3 LOC105371242 NUDT4P2 FMO5 CHD1L LINC01138 LOC728989 MIR6077 LOC101927468 RNVU1-7
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion FMO5 PRKAB2 CHD1L PDIA3P1 RNVU1-8 LOC728989 NBPF13P
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion NBPF14 PDIA3P1 LIX1L NBPF11 PPIAL4G HFE2 LINC00624 GJA5 GJA8 ANKRD34A LOC100996517 NBPF13P GPR89B TXNIP ACP6 LOC284561 RNVU1-8 LOC100132057 NBPF12 NBPF10 CH17-408M7.1 MIR5087 RNU1-13P PDZK1P1 BCL9 NUDT4P1 PRKAB2 LOC105371226 NOTCH2NL LOC100996763 PDE4DIP LOC101928979 RNVU1-1 LOC100505824 HYDIN2 RNVU1-3 LOC105371242 NUDT4P2 FMO5 CHD1L LINC01138 LOC728989 MIR6077 POLR3GL LOC101927468 RNVU1-6 RNVU1-7
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication NBPF14 PDIA3P1 NBPF11 PPIAL4G LINC00624 GJA5 GJA8 LOC100996517 NBPF13P GPR89B ACP6 LOC284561 RNVU1-8 LOC100132057 NBPF12 CH17-408M7.1 MIR5087 RNU1-13P PDZK1P1 BCL9 NUDT4P1 PRKAB2 LOC105371226 NOTCH2NL LOC100996763 PDE4DIP RNVU1-1 LOC100505824 HYDIN2 RNVU1-3 LOC105371242 NUDT4P2 FMO5 CHD1L LINC01138 LOC728989 MIR6077 LOC101927468 RNVU1-7
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain NBPF14 PDIA3P1 NBPF11 PPIAL4G LINC00624 GJA5 GJA8 LOC100996517 NBPF13P GPR89B ACP6 LOC284561 RNVU1-8 LOC100132057 NBPF12 NBPF10 CH17-408M7.1 MIR5087 RNU1-13P PDZK1P1 BCL9 NUDT4P1 PRKAB2 LOC105371226 NOTCH2NL LOC100996763 PDE4DIP LOC101928979 RNVU1-1 LOC100505824 HYDIN2 RNVU1-3 LOC105371242 NUDT4P2 FMO5 CHD1L LINC01138 LOC728989 MIR6077 LOC101927468 RNVU1-6 RNVU1-7
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion NBPF14 PDIA3P1 NBPF11 PPIAL4G LINC00624 GJA5 GJA8 LOC100996517 NBPF13P GPR89B ACP6 LOC284561 RNVU1-8 LOC100132057 NBPF12 NBPF10 CH17-408M7.1 MIR5087 RNU1-13P PDZK1P1 BCL9 NUDT4P1 PRKAB2 LOC105371226 NOTCH2NL LOC100996763 PDE4DIP LOC101928979 RNVU1-1 NBPF9 LOC100505824 HYDIN2 RNVU1-3 LOC105371242 NUDT4P2 FMO5 CHD1L LINC01138 LOC728989 MIR6077 LOC101927468 RNVU1-7
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 PRKAB2 CHD1L PDIA3P1

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