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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186528 on build GRCh38
Cytoband
1q21.1
Assay ID Hs00347842_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 2230 NP_001138302.1
NM_001461.3 9 2363 NP_001452.2
XM_005272946.4 9 2337 XP_005273003.1
XM_005272947.4 9 2081 XP_005273004.1
XM_005272948.4 9 2064 XP_005273005.1
XM_006711245.3 8 2000 XP_006711308.1
XM_011509350.2 9 2368 XP_011507652.1
XM_011509351.2 8 2100 XP_011507653.1
XM_017000801.1 8 2112 XP_016856290.1
XM_017000802.1 8 1882 XP_016856291.1
AK222728.1 9 2078 BAD96448.1
AK225739.1
BC035687.1 7 1903 AAH35687.1
L37080.1 9 2049 AAA67849.1
Z47553.1 9 2055 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss RBM8A TXNIP NUDT4P1 CHD1L ACP6 PDIA3P1 POLR3C RNF115 NOTCH2NL GJA8 HFE2 GJA5 MIR6736 ITGA10 PDE4DIP PIAS3 GNRHR2 NUDT17 LOC100505824 NBPF10 RNVU1-8 LOC100132057 LOC101928979 HYDIN2 BCL9 GPR89A LOC100996517 RNVU1-7 LIX1L RNVU1-1 CD160 NBPF13P FMO5 NBPF14 RNU1-13P PRKAB2 RNVU1-6 ANKRD35 NBPF12 LOC101927468 CH17-408M7.1 ANKRD34A PPIAL4G LOC284561 NUDT4P2 MIR5087 LINC01138 PDZK1 LOC105371242 GPR89B PDZK1P1 LOC728989 LINC00624 LOC105371226 NBPF11 POLR3GL PEX11B LOC100996763 MIR6077 RNVU1-3
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain NUDT4P1 RNU1-13P PRKAB2 RNVU1-6 CHD1L ACP6 NBPF12 LOC101927468 CH17-408M7.1 PDIA3P1 NOTCH2NL PPIAL4G GJA8 GJA5 LOC284561 NUDT4P2 MIR5087 PDE4DIP LINC01138 LOC105371242 LOC100505824 NBPF10 GPR89B PDZK1P1 RNVU1-8 LOC728989 LINC00624 LOC105371226 LOC100132057 NBPF11 LOC101928979 HYDIN2 BCL9 LOC100996517 LOC100996763 RNVU1-7 RNVU1-1 MIR6077 RNVU1-3 NBPF13P FMO5 NBPF14
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss NUDT4P1 RNU1-13P PRKAB2 CHD1L ACP6 NBPF12 LOC101927468 CH17-408M7.1 PDIA3P1 NOTCH2NL PPIAL4G GJA8 GJA5 LOC284561 NUDT4P2 MIR5087 PDE4DIP LINC01138 LOC105371242 LOC100505824 NBPF10 GPR89B PDZK1P1 RNVU1-8 LOC728989 LINC00624 LOC105371226 LOC100132057 NBPF11 HYDIN2 BCL9 LOC100996517 LOC100996763 RNVU1-7 RNVU1-1 MIR6077 RNVU1-3 NBPF13P FMO5 NBPF14
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion RNVU1-8 LOC728989 PRKAB2 CHD1L PDIA3P1 NBPF13P FMO5
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion TXNIP NUDT4P1 RNU1-13P PRKAB2 RNVU1-6 CHD1L ACP6 NBPF12 LOC101927468 CH17-408M7.1 PDIA3P1 ANKRD34A NOTCH2NL PPIAL4G GJA8 HFE2 GJA5 LOC284561 NUDT4P2 MIR5087 PDE4DIP LINC01138 LOC105371242 LOC100505824 NBPF10 GPR89B PDZK1P1 RNVU1-8 LOC728989 LINC00624 LOC105371226 LOC100132057 NBPF11 POLR3GL LOC101928979 HYDIN2 BCL9 LOC100996517 LOC100996763 RNVU1-7 LIX1L RNVU1-1 MIR6077 RNVU1-3 NBPF13P FMO5 NBPF14
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication NUDT4P1 RNU1-13P PRKAB2 CHD1L ACP6 NBPF12 LOC101927468 CH17-408M7.1 PDIA3P1 NOTCH2NL PPIAL4G GJA8 GJA5 LOC284561 NUDT4P2 MIR5087 PDE4DIP LINC01138 LOC105371242 LOC100505824 GPR89B PDZK1P1 RNVU1-8 LOC728989 LINC00624 LOC105371226 LOC100132057 NBPF11 HYDIN2 BCL9 LOC100996517 LOC100996763 RNVU1-7 RNVU1-1 MIR6077 RNVU1-3 NBPF13P FMO5 NBPF14
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain NUDT4P1 RNU1-13P PRKAB2 RNVU1-6 CHD1L ACP6 NBPF12 LOC101927468 CH17-408M7.1 PDIA3P1 NOTCH2NL PPIAL4G GJA8 GJA5 LOC284561 NUDT4P2 MIR5087 PDE4DIP LINC01138 LOC105371242 LOC100505824 NBPF10 GPR89B PDZK1P1 RNVU1-8 LOC728989 LINC00624 LOC105371226 LOC100132057 NBPF11 LOC101928979 HYDIN2 BCL9 LOC100996517 LOC100996763 RNVU1-7 RNVU1-1 MIR6077 RNVU1-3 NBPF13P FMO5 NBPF14
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion NUDT4P1 RNU1-13P PRKAB2 CHD1L ACP6 NBPF12 LOC101927468 CH17-408M7.1 PDIA3P1 NOTCH2NL PPIAL4G GJA8 GJA5 LOC284561 NUDT4P2 MIR5087 PDE4DIP LINC01138 LOC105371242 LOC100505824 NBPF10 GPR89B PDZK1P1 RNVU1-8 LOC728989 LINC00624 LOC105371226 LOC100132057 NBPF11 LOC101928979 HYDIN2 BCL9 LOC100996517 LOC100996763 RNVU1-7 RNVU1-1 MIR6077 RNVU1-3 NBPF13P FMO5 NBPF14 NBPF9
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PRKAB2 CHD1L PDIA3P1 FMO5

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