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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:791323 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00354999_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 7 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_011522573.1 XP_011520875.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 7 1771 BAB15766.1
AK128869.1 6 1354
AK309804.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain MSLN GNG13 RPUSD1 PRR25 CHTF18 MIR662
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain MSLN GNG13 RPUSD1 PRR25 CHTF18 MIR662
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication KCTD5 SNORD60 ABCA17P LUC7L UNKL PDPK1 RPL23AP5 CAPN15 TRAF7 MIR3176 MIR6859-4 LOC105371038 C16orf91 SNRNP25 MIR662 SOX8 TELO2 SNHG19 MEIOB RGS11 GNPTG CACNA1H BAIAP3 LOC106660606 SPSB3 NTN3 HS3ST6 NPW EME2 ECI1 RHBDL1 POLR3K FAM234A RAB11FIP3 TMEM8A ZNF598 LMF1-AS1 RAB26 NTHL1 LINC00254 MIR3178 METTL26 SNORA78 MIR1225 LOC105371047 RNPS1 CASKIN1 TMEM204 MIR4516 MIR3177 RPL3L NOXO1 RAB40C RHBDF1 MAPK8IP3 GFER PDIA2 NARFL LOC105371046 FBXL16 MPG TBC1D24 LOC729652 LOC107987233 LMF1 METRN LOC105371049 SLC9A3R2 FLJ42627 LOC100134368 HBA2 TPSD1 TPSB2 ARHGDIG WDR90 CRAMP1 MRPL28 NHLRC4 MIR6511B1 MLST8 MRPS34 WFIKKN1 SSTR5-AS1 DNASE1L2 MIR3677 CLCN7 PKD1 C16orf59 HBQ1 MIR6768 HN1L PRR25 SNHG9 CCDC78 TBL3 MCRIP2 JMJD8 CCDC154 NDUFB10 LOC105371184 HBM E4F1 HAGH CHTF18 C1QTNF8 TPSG1 MIR3180-5 TSC2 MIR6767 SNORA64 FAM173A BRICD5 PTX4 DECR2 MIR940 CCNF RNF151 MIR4717 TPSAB1 PGP PRSS27 ABCA3 DDX11L10 LOC652276 IFT140 GNG13 HBZ AMDHD2 HAGHL MSRB1 WASIR2 NME4 ATP6V0C UBE2I SYNGR3 LOC100287175 NME3 LOC105371045 FAHD1 RPUSD1 AXIN1 LINC00235 CEMP1 STUB1 IGFALS NPRL3 MIR5587 SNORA10 WDR24 RPS2 PRSS29P RHOT2 TSR3 LOC107984876 MSLN LOC101929280 SSTR5 PRR35 HBA1 NUBP2 PIGQ ERVK13-1
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss GNG13 METTL26 HAGHL CAPN15 PRR25 MIR3176 LOC105371038 CCDC78 MIR662 MCRIP2 LOC100287175 RAB40C JMJD8 NARFL RPUSD1 LOC105371184 LINC00235 FBXL16 CHTF18 STUB1 LOC107987233 METRN MIR5587 WDR24 RHOT2 RHBDL1 FAM173A MSLN LOC101929280 WDR90 PRR35 RAB11FIP3 PIGQ NHLRC4 WFIKKN1
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss GNG13 METTL26 HAGHL CAPN15 PRR25 MIR3176 LOC105371038 CCDC78 MIR662 MCRIP2 LOC100287175 RAB40C JMJD8 NARFL RPUSD1 LOC105371184 LINC00235 FBXL16 CHTF18 STUB1 LOC107987233 METRN MIR5587 WDR24 RHOT2 RHBDL1 FAM173A MSLN LOC101929280 WDR90 PRR35 RAB11FIP3 PIGQ NHLRC4 WFIKKN1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion GNG13 METTL26 HAGHL CAPN15 PRR25 MIR3176 LOC105371038 CCDC78 MIR662 SOX8 MCRIP2 LOC100287175 RAB40C JMJD8 NARFL RPUSD1 LOC105371184 LINC00235 FBXL16 CHTF18 C1QTNF8 STUB1 LOC107987233 LMF1 METRN MIR5587 WDR24 RHOT2 LOC107984876 RHBDL1 FAM173A MSLN LOC101929280 WDR90 SSTR5 PRR35 RAB11FIP3 PIGQ LMF1-AS1 NHLRC4 WFIKKN1 SSTR5-AS1
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss GNG13 RPUSD1 PRR25 CHTF18
nsv571044 Chr.16:790409 - 796798 on Build GRCh38 Loss CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication GNG13 METTL26 HAGHL LOC105371038 CCDC78 MIR662 MCRIP2 LOC100287175 RAB40C JMJD8 NARFL RPUSD1 LOC105371184 FBXL16 CHTF18 STUB1 METRN WDR24 RHOT2 RHBDL1 FAM173A MSLN LOC101929280 WDR90 PIGQ WFIKKN1
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication GNG13 METTL26 HAGHL CAPN15 PRR25 MIR3176 LOC105371038 CCDC78 MIR662 MCRIP2 LOC100287175 RAB40C JMJD8 NARFL RPUSD1 LOC105371184 LINC00235 FBXL16 CHTF18 STUB1 LOC107987233 METRN MIR5587 WDR24 RHOT2 RHBDL1 FAM173A MSLN LOC101929280 WDR90 PRR35 RAB11FIP3 PIGQ NHLRC4 WFIKKN1
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss GNG13 RPUSD1 CHTF18
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss GNG13 RPUSD1 PRR25 CHTF18
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss METRN GNG13 HAGHL WDR24 LOC105371038 CCDC78 RHOT2 MIR662 RHBDL1 FAM173A MSLN MCRIP2 LOC100287175 WDR90 JMJD8 NARFL RPUSD1 LOC105371184 FBXL16 CHTF18 STUB1
nsv571045 Chr.16:790597 - 847566 on Build GRCh38 Gain GNG13 PRR25 CHTF18
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss MSLN RPUSD1 CHTF18 MIR662

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