Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | 1 | 75 | XP_011525147.1 | |
| XM_011526846.1 | 1 | 75 | XP_011525148.1 | |
| XM_011526847.1 | 1 | 75 | XP_011525149.1 | |
| XM_011526848.1 | 1 | 75 | XP_011525150.1 | |
| XM_011526849.1 | 1 | 75 | XP_011525151.1 | |
| XM_017026666.1 | 1 | 75 | XP_016882155.1 | |
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 MIR935
TARM1
CACNG8
VSTM1
CACNG6
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
TFPT
TARM1
VSTM1
OSCAR
NDUFA3
PRPF31
|
| nsv182 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
TARM1
VSTM1
OSCAR
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
MIR935
CACNG8
VSTM1
CACNG7
CACNG6
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MIR526A1
LILRB2
MIR1323
PRKCG
CACNG8
TSEN34
MIR1283-2
OSCAR
MIR526A2
MIR371B
CACNG6
MIR516B2
MIR516B1
CACNG7
MYADM
MIR522
NDUFA3
BIRC8
MIR4752
MIR518A2
MIR935
TPM3P9
VN1R2
LENG1
MIR520E
LOC105372457
ZNF818P
MIR518F
LILRB5
MIR373
MIR519B
MIR371A
ZNF677
MIR520F
DPRX
ZNF813
MIR521-1
MIR524
MIR516A1
MIR519A2
TMC4
MIR372
MIR518B
MIR520D
MIR526B
MIR512-1
LOC284379
ZNF761
RPS9
MIR519E
MIR517C
MIR516A2
MIR1283-1
MIR518C
VN1R4
VSTM1
MIR512-2
MIR517B
NLRP12
PRPF31
ZNF665
MIR518A1
MIR518D
LILRA6
ZNF845
MIR520C
MIR520H
MIR527
MBOAT7
MIR520B
MIR518E
MIR517A
LILRA5
ZNF525
MIR520A
MIR523
LILRB3
TFPT
MIR525
TARM1
MIR519C
MIR519A1
CNOT3
FAM90A27P
MIR515-1
MIR521-2
MIR520G
ZNF331
MIR498
MIR515-2
MIR519D
ZNF765
|
| esv3644780 | Chr.19:54057724 - 54066399 on Build GRCh38 | Gain |
VSTM1
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
TFPT
MIR935
TARM1
CACNG8
VSTM1
OSCAR
NDUFA3
PRPF31
CACNG6
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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