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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:624934 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00367935_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 1 134 NP_001165439.1
NM_021924.4 1 134 NP_068743.2
NM_031264.3 1 134 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 2 293 AAG16732.1
AF258676.1 2 293 AAG16733.1
AF258677.1 2 192
AF258678.1 1 236
AF258679.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK300991.1
AK308040.1
AK309157.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DA373160.1 1 76
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss CDHR5 SCT IRF7
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss LOC143666 CDHR5 RASSF7 LMNTD2 MIR210 MIR210HG DEAF1 SCT IRF7 DRD4 PHRF1
esv2668299 Chr.11:624845 - 628192 on Build GRCh38 Deletion CDHR5 SCT
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LOC143666 LRRC56 LOC101059906 CDHR5 RASSF7 HRAS LMNTD2 MIR210 MIR210HG SCT IRF7 PHRF1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PTDSS2 ANO9 TALDO1 POLR2L PKP3 HRAS CHID1 RPLP2 LOC101927503 PANO1 MIR210HG DEAF1 LRRC56 CRACR2B RNH1 LOC101059906 LOC171391 SIGIRR CDHR5 MUC5AC MUC2 LMNTD2 MIR210 B4GALNT4 TMEM80 TOLLIP SNORA52 MUC5B RASSF7 SLC25A22 TSPAN4 PIDD1 PDDC1 SCT IRF7 PHRF1 PNPLA2 CEND1 AP2A2 LOC143666 MUC6 MIR6744 CD151 EPS8L2 DRD4
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss CDHR5 DEAF1 SCT IRF7 DRD4 PHRF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PTDSS2 ANO9 TALDO1 POLR2L HRAS CHID1 RPLP2 LOC101927503 PANO1 MIR210HG DEAF1 LRRC56 CRACR2B RNH1 LOC101059906 LOC171391 SIGIRR CDHR5 MUC5AC MUC2 LMNTD2 TOLLIP-AS1 MIR210 TMEM80 TOLLIP SNORA52 MUC5B RASSF7 SLC25A22 TSPAN4 PIDD1 PDDC1 SCT IRF7 PHRF1 PNPLA2 CEND1 AP2A2 LOC143666 MUC6 MIR6744 CD151 EPS8L2 DRD4
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss CDHR5 DEAF1 SCT IRF7 DRD4 PHRF1
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain RASSF7 HRAS MIR210HG DEAF1 SCT IRF7 PHRF1 LOC143666 LRRC56 CDHR5 LMNTD2 MIR210 DRD4
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PTDSS2 RASSF7 HRAS MIR210HG DEAF1 SCT IRF7 PHRF1 LOC143666 LRRC56 RNH1 LOC101059906 CDHR5 LMNTD2 MIR210 DRD4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PTDSS2 ANO9 TALDO1 POLR2L PKP3 HRAS CHID1 RPLP2 PANO1 MIR210HG DEAF1 LRRC56 CRACR2B RNH1 LOC101059906 LOC171391 SIGIRR CDHR5 LMNTD2 MIR210 B4GALNT4 TMEM80 SNORA52 RASSF7 SLC25A22 TSPAN4 PIDD1 PDDC1 SCT IRF7 PHRF1 PNPLA2 CEND1 AP2A2 LOC143666 CD151 EPS8L2 DRD4
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PTDSS2 TALDO1 POLR2L HRAS CHID1 RPLP2 PANO1 MIR210HG DEAF1 LRRC56 CRACR2B RNH1 LOC101059906 LOC171391 CDHR5 LMNTD2 MIR210 TMEM80 SNORA52 RASSF7 SLC25A22 TSPAN4 PIDD1 PDDC1 SCT IRF7 PHRF1 PNPLA2 CEND1 LOC143666 CD151 EPS8L2 DRD4

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