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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:624934 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00367935_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 1 134 NP_001165439.1
NM_021924.4 1 134 NP_068743.2
NM_031264.3 1 134 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 2 293 AAG16732.1
AF258676.1 2 293 AAG16733.1
AF258677.1 2 192
AF258678.1 1 236
AF258679.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK300991.1
AK308040.1
AK309157.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DA373160.1 1 76
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain MIR210 MIR210HG DRD4 LMNTD2 LOC143666 RASSF7 PHRF1 IRF7 CDHR5 SCT DEAF1
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 CDHR5 SCT
esv2668299 Chr.11:624845 - 628192 on Build GRCh38 Deletion CDHR5 SCT
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion MIR210 MIR210HG LRRC56 LMNTD2 LOC143666 RASSF7 PHRF1 IRF7 CDHR5 LOC101059906 SCT HRAS
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PTDSS2 PKP3 LMNTD2 LOC171391 TSPAN4 ANO9 CHID1 AP2A2 RNH1 RPLP2 CDHR5 B4GALNT4 CEND1 TMEM80 HRAS PNPLA2 MIR210 MIR210HG MUC5B PDDC1 PHRF1 MIR6744 LOC101059906 PANO1 PIDD1 SNORA52 CRACR2B LOC101927503 DRD4 MUC6 POLR2L SLC25A22 TALDO1 MUC2 EPS8L2 LRRC56 LOC143666 RASSF7 IRF7 MUC5AC TOLLIP SIGIRR SCT DEAF1 CD151
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss DRD4 PHRF1 IRF7 CDHR5 SCT DEAF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PTDSS2 LMNTD2 LOC171391 TSPAN4 ANO9 CHID1 AP2A2 RNH1 RPLP2 CDHR5 CEND1 TMEM80 HRAS PNPLA2 MIR210 MIR210HG MUC5B PDDC1 PHRF1 MIR6744 TOLLIP-AS1 LOC101059906 PANO1 PIDD1 SNORA52 CRACR2B LOC101927503 DRD4 MUC6 POLR2L SLC25A22 TALDO1 MUC2 EPS8L2 LRRC56 LOC143666 RASSF7 IRF7 MUC5AC TOLLIP SIGIRR SCT DEAF1 CD151
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss DRD4 PHRF1 IRF7 CDHR5 SCT DEAF1
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain DRD4 LMNTD2 CDHR5 HRAS MIR210 MIR210HG LRRC56 LOC143666 RASSF7 PHRF1 IRF7 SCT DEAF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PTDSS2 PKP3 LMNTD2 LOC171391 TSPAN4 ANO9 CHID1 AP2A2 RNH1 RPLP2 CDHR5 B4GALNT4 CEND1 TMEM80 HRAS PNPLA2 MIR210 MIR210HG PDDC1 PHRF1 LOC101059906 PANO1 PIDD1 SNORA52 CRACR2B DRD4 POLR2L SLC25A22 TALDO1 EPS8L2 LRRC56 LOC143666 RASSF7 IRF7 SIGIRR SCT DEAF1 CD151
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PTDSS2 DRD4 LMNTD2 RNH1 CDHR5 HRAS MIR210 MIR210HG LRRC56 LOC143666 RASSF7 PHRF1 IRF7 LOC101059906 SCT DEAF1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PTDSS2 LMNTD2 LOC171391 TSPAN4 CHID1 RNH1 RPLP2 CDHR5 CEND1 TMEM80 HRAS PNPLA2 MIR210 MIR210HG PDDC1 PHRF1 LOC101059906 PANO1 PIDD1 SNORA52 CRACR2B DRD4 POLR2L SLC25A22 TALDO1 EPS8L2 LRRC56 LOC143666 RASSF7 IRF7 SCT DEAF1 CD151

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