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See other C9ORF139 CNV Assays ›
Gene Symbol
C9orf139
Assay Reference Genome
Location

Chr.9:137032966 on build GRCh38
Cytoband
9q34.3
Assay ID Hs00385096_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 401563

Gene Name:

 chromosome 9 open reading frame 139

Gene Aliases:

 -

Location:

 Chr.9:137027464-137037770 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C9orf139 NM_207511.2 2 1417 NP_997394.1
XM_017014717.1 2 382 XP_016870206.1
AK124899.1 2 1417 BAC85986.1
BC132809.1 1 191
BC136839.1 1 191

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss ENTPD2 C9orf142 MAN1B1-AS1 LOC101930307 ABCA2 FUT7 C9orf139 SAPCD2 DPP7 TMEM210 GRIN1 NPDC1 LCNL1 MIR3621 PRR31 PTGDS LRRC26 CLIC3 MAN1B1 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss MIR4292 TUBB4B PNPLA7 SSNA1 NELFB CCDC183 SAPCD2 EDF1 ANAPC2 PTGDS C8G RNF224 STPG3 NSMF LOC101930307 ABCA2 SLC34A3 FUT7 DPP7 TMEM210 PHPT1 NPDC1 RNF208 NOXA1 MAMDC4 PRR31 CCDC183-AS1 TRAF2 TOR4A ENTPD2 C9orf142 MAN1B1-AS1 RABL6 TMEM203 MIR7114 C9orf139 EXD3 FAM166A TPRN NDOR1 LCN12 MIR4479 ENTPD8 C9orf172 NRARP C9orf173-AS1 GRIN1 FBXW5 LCNL1 MIR3621 CYSRT1 LRRC26 CLIC3 MAN1B1 UAP1L1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion ENTPD2 LCN12 C9orf142 MAN1B1-AS1 LOC101930307 ABCA2 FUT7 C9orf139 SAPCD2 DPP7 NPDC1 LCNL1 PRR31 PTGDS C8G CLIC3 MAN1B1 UAP1L1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4292 SNORA17B FAM69B NALT1 INPP5E CCDC183 SAPCD2 EDF1 PTGDS C8G SDCCAG3 SEC16A DNLZ LOC101930307 ABCA2 C9orf163 FUT7 DPP7 TMEM210 PHPT1 SNORA17A NPDC1 CARD9 MAMDC4 SNAPC4 PMPCA LCN15 PRR31 LOC100128593 CCDC183-AS1 TRAF2 HSPC324 TMEM141 ENTPD2 AGPAT2 C9orf142 MAN1B1-AS1 RABL6 LCN6 C9orf139 MIR4673 LINC01451 NOTCH1 EGFL7 MIR6722 SNHG7 LCN12 MIR126 MIR4479 C9orf172 LCN10 GRIN1 FBXW5 LCNL1 MIR3621 LRRC26 CLIC3 MAN1B1 UAP1L1 LCN8 MIR4674
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain ENTPD2 SSNA1 MAN1B1-AS1 LOC101930307 FUT7 C9orf139 SAPCD2 DPP7 TMEM210 GRIN1 ANAPC2 NPDC1 MIR3621 LRRC26 MAN1B1 UAP1L1
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion MIR4292 TUBB4B SNORA17B FAM69B SSNA1 NELFB CCDC183 SAPCD2 EDF1 ANAPC2 PTGDS C8G RNF224 STPG3 LOC101930307 ABCA2 SLC34A3 FUT7 DPP7 TMEM210 PHPT1 SNORA17A NPDC1 RNF208 MAMDC4 LCN15 PRR31 LOC100128593 CCDC183-AS1 TRAF2 TOR4A HSPC324 TMEM141 ENTPD2 AGPAT2 C9orf142 MAN1B1-AS1 RABL6 TMEM203 LCN6 C9orf139 EXD3 FAM166A TPRN LINC01451 NDOR1 EGFL7 MIR6722 SNHG7 LCN12 MIR126 MIR4479 C9orf172 NRARP C9orf173-AS1 LCN10 GRIN1 FBXW5 LCNL1 MIR3621 CYSRT1 LRRC26 CLIC3 MAN1B1 UAP1L1 LCN8
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss NPDC1 ENTPD2 ABCA2 FUT7 C9orf139

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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