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See other C9ORF139 CNV Assays ›
Gene Symbol
C9orf139
Assay Reference Genome
Location

Chr.9:137032966 on build GRCh38
Cytoband
9q34.3
Assay ID Hs00385096_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 401563

Gene Name:

 chromosome 9 open reading frame 139

Gene Aliases:

 -

Location:

 Chr.9:137027464-137037770 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C9orf139 NM_207511.2 2 1417 NP_997394.1
XM_017014717.1 2 382 XP_016870206.1
AK124899.1 2 1417 BAC85986.1
BC132809.1 1 191
BC136839.1 1 191

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MIR3621 C9orf139 PTGDS GRIN1 LOC101930307 LCNL1 NPDC1 TMEM210 MAN1B1-AS1 MAN1B1 PRR31 C9orf142 FUT7 DPP7 CLIC3 SAPCD2 ABCA2 LRRC26 ENTPD2 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss GRIN1 LOC101930307 CCDC183-AS1 MIR4292 NELFB CYSRT1 FAM166A CLIC3 TPRN LRRC26 EDF1 UAP1L1 TRAF2 FBXW5 LCNL1 MIR4479 TMEM203 MAN1B1 PRR31 SSNA1 FUT7 TUBB4B MIR7114 DPP7 CCDC183 NSMF NDOR1 C9orf172 RNF224 C9orf139 NPDC1 TMEM210 MAN1B1-AS1 TOR4A C8G C9orf142 ENTPD8 LCN12 SAPCD2 PHPT1 PNPLA7 STPG3 C9orf173-AS1 MIR3621 PTGDS NOXA1 SLC34A3 ANAPC2 EXD3 MAMDC4 ABCA2 NRARP RNF208 ENTPD2 RABL6
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C9orf139 PTGDS LOC101930307 LCNL1 NPDC1 MAN1B1-AS1 MAN1B1 PRR31 C8G C9orf142 FUT7 LCN12 DPP7 CLIC3 SAPCD2 ABCA2 ENTPD2 UAP1L1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss SNHG7 GRIN1 LOC101930307 CCDC183-AS1 LCN10 MIR4292 SNAPC4 CLIC3 LRRC26 DNLZ EDF1 FAM69B UAP1L1 NALT1 LOC100128593 TRAF2 FBXW5 LCNL1 MIR4479 LINC01451 MAN1B1 PRR31 FUT7 CARD9 NOTCH1 DPP7 CCDC183 EGFL7 LCN15 C9orf172 MIR4674 C9orf139 NPDC1 TMEM210 MAN1B1-AS1 MIR126 SDCCAG3 C8G C9orf142 LCN12 SAPCD2 MIR4673 TMEM141 SNORA17B PHPT1 C9orf163 PMPCA MIR3621 SEC16A PTGDS MIR6722 AGPAT2 SNORA17A MAMDC4 ABCA2 HSPC324 INPP5E ENTPD2 RABL6 LCN6 LCN8
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain MIR3621 C9orf139 GRIN1 LOC101930307 NPDC1 TMEM210 MAN1B1-AS1 MAN1B1 SSNA1 FUT7 ANAPC2 DPP7 SAPCD2 LRRC26 ENTPD2 UAP1L1
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss C9orf139 NPDC1 ABCA2 ENTPD2 FUT7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion SNHG7 GRIN1 LOC101930307 CCDC183-AS1 LCN10 MIR4292 NELFB CYSRT1 FAM166A CLIC3 TPRN LRRC26 EDF1 FAM69B UAP1L1 LOC100128593 TRAF2 FBXW5 LCNL1 MIR4479 TMEM203 LINC01451 MAN1B1 PRR31 SSNA1 FUT7 TUBB4B DPP7 CCDC183 EGFL7 LCN15 NDOR1 C9orf172 RNF224 C9orf139 NPDC1 TMEM210 MAN1B1-AS1 MIR126 TOR4A C8G C9orf142 LCN12 SAPCD2 TMEM141 SNORA17B PHPT1 STPG3 C9orf173-AS1 MIR3621 PTGDS MIR6722 AGPAT2 SLC34A3 ANAPC2 EXD3 SNORA17A MAMDC4 ABCA2 NRARP RNF208 HSPC324 ENTPD2 RABL6 LCN6 LCN8

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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