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See other TRPM4 CNV Assays ›
Gene Symbol
TRPM4
Assay Reference Genome
Location

Chr.19:49181345 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00419627_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54795

Gene Name:

 transient receptor potential cation channel subfamily M member 4

Gene Aliases:

 LTrpC4, PFHB1B, TRPM4B, hTRPM4

Location:

 Chr.19:49157741-49211841 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPM4 NM_001195227.1 NP_001182156.1
NM_001321281.1 NP_001308210.1
NM_001321282.1 NP_001308211.1
NM_001321283.1 NP_001308212.1
NM_001321285.1 NP_001308214.1
NM_017636.3 NP_060106.2
XM_005259017.1 XP_005259074.1
AF497623.1 AAM18083.1
AJ575813.1 CAE05941.1
AK000048.1 BAA90907.1
AK292862.1
AK295820.1
AK307897.1
AY046396.1 AAL02142.1
AY297044.1 AAP44473.1
AY297045.1 AAP44474.1
AY297046.1 AAP44475.1
BC132727.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3574576 Chr.19:49179641 - 49186040 on Build GRCh38 Gain TRPM4
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CARD8 SNAR-A1 SNAR-G1 ZNF114 SNAR-A8 SLC17A7 SNAR-A14 FUT2 ALDH16A1 SNORD35A IRF3 TSKS NOSIP ZNF473 PTOV1-AS1 SNAR-A6 SNAR-A4 GRIN2D CGB8 CGB7 C19orf68 KCNA7 BCAT2 GYS1 KDELR1 SNORD32A SULT2B1 LHB LIN7B SNORD33 AP2A1 FGF21 SPHK2 SNAR-A5 ELSPBP1 NTN5 CGB1 PNKP SCAF1 HSD17B14 FCGRT LOC105447645 RPL13A PTOV1 TBC1D17 SIGLEC16 LOC105372430 PRMT1 MIR150 SNAR-G2 SNAR-B2 BCL2L12 SLC6A16 PPFIA3 SNORD35B PRRG2 PRR12 MIR4324 SIGLEC11 PTH2 SNAR-A11 RUVBL2 CABP5 LIG1 TRPM4 DHDH SNRNP70 MIR4751 ATF5 HRC GRWD1 NUCB1 NUCB1-AS1 RPL18 MIR5088 RASIP1 TEAD2 MIR4750 LMTK3 MED25 EMP3 SNAR-C1 SNAR-A12 FLT3LG CD37 RRAS RPS11 SNAR-A7 PTOV1-AS2 CGB2 DBP SNAR-C5 CYTH2 MIR4749 SPACA4 SNAR-C3 KCNJ14 SNAR-A3 SNAR-D PLEKHA4 MIR6798 SEC1P FAM83E CA11 SNAR-A10 CARD8-AS1 CGB3 SNAR-B1 SYNGR4 SNAR-A13 TMEM143 FUT1 CCDC155 MIR6800 BSPH1 SNAR-A9 SNORD34 GFY FTL FLJ26850 NTF4 LOC101059948 PIH1D1 SNAR-C4 IL4I1 BAX CGB5 DKKL1 LOC101928295 NUP62 PLA2G4C-AS1 LOC100287477 C19orf73 PLA2G4C AKT1S1 IZUMO1 MAMSTR CPT1C MIR6799 VRK3 ADM5 SNAR-C2 PPP1R15A TULP2 SNAR-A2 FUZ CCDC114 RCN3
dgv1057e212 Chr.19:49165806 - 49183334 on Build GRCh38 Loss TRPM4
nsv1060108 Chr.19:49118098 - 49183334 on Build GRCh38 Gain TRPM4 PPFIA3 HRC C19orf73 LIN7B

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