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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49664719 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00427297_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 NP_001184051.1
NM_001197123.1 NP_001184052.1
NM_001197124.1 NP_001184053.1
NM_001197125.1 NP_001184054.1
NM_001197126.1 NP_001184055.1
NM_001197127.1 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 NP_001562.1
NR_045568.1
XM_006723197.1 XP_006723260.1
XM_006723198.1 XP_006723261.1
XM_006723201.1 XP_006723264.1
XM_006723202.2 XP_006723265.1
XM_017026766.1 XP_016882255.1
XM_017026767.1 XP_016882256.1
AB102884.1 BAD89413.1
AB102887.1 BAD89416.1
AK057577.1
AK292027.1
AK314421.1
BC000660.2 AAH00660.1
BC009395.2 AAH09395.1
BC071721.1 AAH71721.1
CB961512.1
HM357932.1
HM357933.1
HM357934.1
HM357935.1
HM357936.1
HM357937.1
Z56281.1 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss RRAS NOSIP PRRG2 CPT1C PRR12 MIR5088 PRMT1 ADM5 BCL2L12 SCAF1 IRF3
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss RRAS NOSIP PRRG2 CPT1C PRR12 MIR5088 PRMT1 ADM5 BCL2L12 SCAF1 IRF3
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss TULP2 NOSIP SNRNP70 GYS1 SNORD32A PTOV1 ZNF473 BCL2L12 RUVBL2 SNAR-A11 SNAR-A13 SNAR-C5 CD37 BSPH1 SNAR-A2 SNAR-C1 CYTH2 MED25 FUT1 CGB1 ZNF114 SNAR-A3 TRPM4 TMEM143 LOC100287477 EMP3 MIR4324 PRR12 MIR150 MIR4751 SLC17A7 VRK3 LOC101059948 ALDH16A1 NTF4 CPT1C DHDH RASIP1 RPL18 SNAR-A1 PPFIA3 FLT3LG CABP5 SNORD35A SNAR-A14 SNAR-A12 PTOV1-AS1 SULT2B1 PNKP CCDC114 SNAR-G1 FTL SNORD33 RRAS SNORD34 MIR6799 TSKS CARD8-AS1 MIR5088 PLA2G4C-AS1 DKKL1 PRMT1 SPHK2 SNAR-B1 CGB8 LOC105372430 PPP1R15A TEAD2 CA11 SNAR-B2 NTN5 SNAR-G2 PIH1D1 RPS11 ELSPBP1 FUZ NUCB1 BCAT2 CGB2 SPACA4 SIGLEC16 SNAR-A6 NUP62 SNAR-C4 CGB7 AP2A1 MAMSTR MIR4749 CGB3 RPL13A ADM5 FCGRT GRWD1 PTH2 PLEKHA4 FLJ26850 SCAF1 SNAR-C3 IRF3 TBC1D17 MIR6798 SNAR-C2 LOC101928295 LOC105447645 SEC1P SNAR-A10 LHB IL4I1 SNAR-A9 CCDC155 MIR4750 PTOV1-AS2 GRIN2D HSD17B14 FGF21 NUCB1-AS1 KDELR1 FAM83E PLA2G4C SNAR-A7 DBP MIR6800 BAX LMTK3 GFY HRC SIGLEC11 AKT1S1 SNAR-A4 SNAR-D PRRG2 LIG1 CGB5 KCNA7 SNORD35B C19orf68 RCN3 C19orf73 LIN7B SNAR-A5 CARD8 SLC6A16 FUT2 ATF5 SNAR-A8 IZUMO1 SYNGR4 KCNJ14
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain AP2A1 PRR12 MIR4749 PTOV1 ADM5 PTOV1-AS2 BCL2L12 PTOV1-AS1 MIR6800 SCAF1 FUZ IRF3 RRAS CPT1C MIR6799 TSKS MIR5088 PRMT1 MED25
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain RRAS NOSIP PRRG2 CPT1C PRR12 MIR5088 PRMT1 ADM5 BCL2L12 SCAF1 IRF3
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion NOSIP AP2A1 MIR4749 PTOV1 ADM5 BCL2L12 PTOV1-AS1 MIR6800 PNKP SCAF1 IRF3 TBC1D17 RRAS AKT1S1 PRRG2 MIR6799 TSKS MIR5088 PRMT1 MED25 IL4I1 PRR12 MIR4750 MIR4751 PTOV1-AS2 FUZ CPT1C NUP62 ATF5
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion NOSIP AP2A1 SNORD32A RPL13A ADM5 FCGRT BCL2L12 PTOV1-AS1 MIR6800 SCAF1 IRF3 SNORD33 RRAS PRRG2 SNORD34 MIR6799 TSKS MIR5088 PRMT1 MED25 PRR12 SNORD35B MIR150 RCN3 RPS11 FUZ CPT1C SNORD35A
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss RRAS NOSIP PRRG2 PRR12 PRMT1 BCL2L12 SCAF1 IRF3

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