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Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970463 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00437532_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 NP_005501.2
XM_006715005.3 XP_006715068.1
XM_017010329.1 XP_016865818.1
AF059252.1 AAC78603.1
AK310107.1
BC009344.2 AAH09344.1
BC019083.2 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss ZBTB12 TNXB HLA-DRB5 NEU1 C4B HLA-DQB1 AGER PPT2 ATF6B PBX2 HLA-DQB1-AS1 HLA-DRA BTNL2 HCG23 TNXA SNORD48 RNF5 MIR1236 CFB NOTCH4 PRRT1 EGFL8 CYP21A2 AGPAT1 LOC101929163 GPSM3 C2-AS1 HLA-DQA1 HLA-DRB6 CYP21A1P DXO HSPA1A LOC100507547 SNORD52 MIR6833 PPT2-EGFL8 C6orf48 EHMT2 MIR6721 HSPA1B STK19 HLA-DRB1 SLC44A4 C4A C6orf10 NELFE FKBPL SKIV2L C2
nsv428141 Chr.6:31903735 - 32125066 on Build GRCh38 Gain+Loss ATF6B C4A C2-AS1 NELFE CYP21A1P DXO TNXA TNXB MIR1236 CFB SKIV2L C4B CYP21A2 C2 STK19
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion TNF HCP5 LY6G6C AIF1 ATP6V1G2-DDX39B ZBTB12 LY6G6F C6orf47 LY6G5C DDX39B APOM BAG6 LTA TNXB HLA-DRB5 ATP6V1G2 NEU1 C6orf25 C4B LY6G6D MIR4646 AGER SNORD117 PPT2 ATF6B LTB PBX2 SAPCD1-AS1 HSPA1L NFKBIL1 MICB HLA-DRA LSM2 BTNL2 HCG23 TNXA SNORD48 LST1 LY6G5B RNF5 ABHD16A MIR1236 CFB CSNK2B NOTCH4 PRRT1 EGFL8 CYP21A2 AGPAT1 NCR3 LOC101929163 GPSM3 SAPCD1 C2-AS1 LOC102725068 HLA-DRB6 MCCD1 CYP21A1P DXO HSPA1A LOC100507547 SNORD52 DDAH2 MIR6833 MIR6832 PPT2-EGFL8 VARS C6orf48 EHMT2 MIR6721 HSPA1B SNORD84 PRRC2A STK19 HLA-DRB1 SLC44A4 C4A C6orf10 NELFE HCG26 MSH5-SAPCD1 LY6G6E GPANK1 DDX39B-AS1 MSH5 FKBPL VWA7 SKIV2L SNORA38 LOC100287329 C2 CLIC1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss TNF HCP5 LY6G6C AIF1 ATP6V1G2-DDX39B ZBTB12 LY6G6F C6orf47 LY6G5C DDX39B APOM BAG6 LTA TNXB ATP6V1G2 NEU1 C6orf25 C4B LY6G6D MIR4646 SNORD117 LTB SAPCD1-AS1 HSPA1L NFKBIL1 MICB LSM2 TNXA SNORD48 LST1 LY6G5B ABHD16A MIR1236 CFB CSNK2B HLA-B MIR6891 CYP21A2 MICA NCR3 SAPCD1 C2-AS1 LOC102725068 MCCD1 CYP21A1P DXO HSPA1A SNORD52 DDAH2 MIR6832 VARS C6orf48 EHMT2 HSPA1B SNORD84 PRRC2A STK19 SLC44A4 C4A NELFE HCG26 MSH5-SAPCD1 LY6G6E GPANK1 DDX39B-AS1 MSH5 VWA7 SKIV2L SNORA38 LOC100287329 C2 CLIC1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HCP5 LY6G6C AIF1 ATP6V1G2-DDX39B ZBTB12 LY6G6F HLA-DQA2 APOM MIR219A1 B3GALT4 ZBTB9 MIR6834 HLA-DOA HLA-DQB2 HLA-DPB2 C6orf25 C4B LY6G6D SNORD117 TAPBP ATF6B SAPCD1-AS1 NFKBIL1 HLA-DRA BTNL2 HCG23 TNXA SNORD48 LY6G5B RNF5 MIR1236 CFB CSNK2B NOTCH4 RXRB CYP21A2 HCG25 SLC39A7 KIFC1 TAP2 SAPCD1 C2-AS1 HSD17B8 HLA-DMB CYP21A1P DXO HLA-DPB1 HSPA1A DDAH2 MIR6833 MIR6832 PPT2-EGFL8 VARS EHMT2 SNORD84 STK19 HLA-DRB1 SLC44A4 MIR5004 C6orf10 MSH5-SAPCD1 COL11A2 LOC100294145 FKBPL PHF1 SYNGAP1 VWA7 SKIV2L HLA-DMA C2 TNF C6orf47 HLA-DPA1 RING1 LY6G5C HCG24 DDX39B BAG6 LTA TNXB HLA-DRB5 CUTA ATP6V1G2 NEU1 HLA-DQB1 MIR3135B MIR4646 AGER PPT2 LTB PBX2 HSPA1L HLA-DQB1-AS1 MICB PSMB9 LSM2 LST1 ABHD16A BRD2 PRRT1 EGFL8 PFDN6 HLA-DOB AGPAT1 NCR3 LOC101929163 PPP1R2P1 GPSM3 LOC102725068 HLA-DQA1 ZBTB22 HLA-DRB6 MCCD1 LOC100507547 MIR6873 SNORD52 RGL2 DAXX C6orf48 MIR6721 HSPA1B PRRC2A C4A NELFE WDR46 HCG26 RPS18 PSMB8 VPS52 PSMB8-AS1 LY6G6E GPANK1 DDX39B-AS1 MSH5 TAP1 SNORA38 LOC100287329 CLIC1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HCP5 LY6G6C AIF1 ATP6V1G2-DDX39B ZBTB12 LY6G6F HLA-DQA2 APOM MIR219A1 B3GALT4 ZBTB9 MIR6834 HLA-DOA HLA-DQB2 HLA-DPB2 C6orf25 C4B LY6G6D SNORD117 TAPBP ATF6B SAPCD1-AS1 NFKBIL1 HLA-DRA BTNL2 HCG23 TNXA SNORD48 LY6G5B RNF5 MIR1236 CFB CSNK2B NOTCH4 RXRB CYP21A2 HCG25 SLC39A7 KIFC1 TAP2 SAPCD1 C2-AS1 HSD17B8 HLA-DMB CYP21A1P DXO HLA-DPB1 HSPA1A DDAH2 MIR6833 MIR6832 PPT2-EGFL8 VARS EHMT2 SNORD84 STK19 HLA-DRB1 SLC44A4 MIR5004 C6orf10 MSH5-SAPCD1 COL11A2 LOC100294145 FKBPL PHF1 SYNGAP1 VWA7 SKIV2L HLA-DMA C2 TNF C6orf47 HLA-DPA1 RING1 LY6G5C HCG24 DDX39B BAG6 LTA TNXB HLA-DRB5 CUTA ATP6V1G2 NEU1 HLA-DQB1 MIR3135B MIR4646 AGER PPT2 LTB PBX2 HSPA1L HLA-DQB1-AS1 MICB PSMB9 LSM2 LST1 ABHD16A BRD2 PRRT1 EGFL8 PFDN6 HLA-DOB AGPAT1 NCR3 LOC101929163 PPP1R2P1 GPSM3 LOC102725068 HLA-DQA1 ZBTB22 HLA-DRB6 MCCD1 LOC100507547 MIR6873 SNORD52 RGL2 DAXX C6orf48 MIR6721 HSPA1B PRRC2A C4A NELFE WDR46 HCG26 RPS18 PSMB8 VPS52 PSMB8-AS1 LY6G6E GPANK1 DDX39B-AS1 MSH5 TAP1 SNORA38 LOC100287329 CLIC1
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss C2-AS1 MIR1236 NELFE CFB SKIV2L DXO C2 STK19
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss TNF HCP5 LY6G6C AIF1 ATP6V1G2-DDX39B ZBTB12 LY6G6F C6orf47 LY6G5C DDX39B APOM BAG6 LTA TNXB ATP6V1G2 NEU1 C6orf25 C4B LY6G6D MIR4646 AGER SNORD117 PPT2 ATF6B LTB PBX2 SAPCD1-AS1 HSPA1L NFKBIL1 MICB HLA-DRA LSM2 BTNL2 HCG23 TNXA SNORD48 LST1 LY6G5B RNF5 ABHD16A MIR1236 CFB CSNK2B NOTCH4 PRRT1 EGFL8 HLA-B MIR6891 CYP21A2 AGPAT1 MICA NCR3 LOC101929163 GPSM3 SAPCD1 C2-AS1 LOC102725068 MCCD1 CYP21A1P DXO HSPA1A LOC100507547 SNORD52 DDAH2 MIR6833 MIR6832 PPT2-EGFL8 VARS C6orf48 EHMT2 MIR6721 HSPA1B SNORD84 PRRC2A STK19 SLC44A4 C4A C6orf10 NELFE HCG26 MSH5-SAPCD1 LY6G6E GPANK1 DDX39B-AS1 MSH5 FKBPL VWA7 SKIV2L SNORA38 LOC100287329 C2 CLIC1
nsv284 Chr.6:31957962 - 32028944 on Build GRCh38 Deletion C4A NELFE CYP21A1P SKIV2L DXO C4B TNXA STK19

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