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See other HS3ST6 CNV Assays ›
Gene Symbol
HS3ST6
Assay Reference Genome
Location

Chr.16:1911642 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00438710_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 64711

Gene Name:

 heparan sulfate-glucosamine 3-sulfotransferase 6

Gene Aliases:

 3-OST-6, HS3ST5

Location:

 Chr.16:1911463-1921428 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HS3ST6 NM_001009606.3 2 977 NP_001009606.3
XM_011522608.2 2 1203 XP_011520910.1
XM_011522609.2 2 2684 XP_011520911.1
CK300523.1 1 193

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LMF1-AS1 TSR3 LINC00254 RPL3L E4F1 PRR25 HN1L EME2 TSC2 RHOT2 TPSB2 MIR6511B1 FAM234A WDR90 MIR5587 MIR3180-5 NPRL3 CAPN15 RHBDF1 CCDC78 ABCA17P MIR6768 MEIOB GNG13 SNRNP25 MLST8 CLCN7 TELO2 GFER SNORD60 SNHG19 NHLRC4 NUBP2 NTN3 LOC729652 PRSS29P SNORA78 LUC7L CACNA1H MCRIP2 ECI1 LOC100134368 MIR3677 GNPTG IFT140 NARFL MIR1225 LOC105371047 CASKIN1 FAHD1 NDUFB10 ABCA3 RNPS1 JMJD8 FAM173A PDIA2 MSLN TPSAB1 ATP6V0C SNHG9 RAB11FIP3 NTHL1 MPG METTL26 HAGHL NME3 RPL23AP5 CCDC154 FLJ42627 NME4 C16orf59 TMEM204 LOC105371184 MIR940 NOXO1 SOX8 TBL3 MIR4516 MRPS34 LOC105371038 MSRB1 STUB1 PDPK1 IGFALS PRSS27 CRAMP1 BAIAP3 UBE2I UNKL CEMP1 HBM LOC107987233 METRN MRPL28 PIGQ LOC652276 LOC107984876 HBZ PKD1 SNORA64 DDX11L10 MIR662 TPSD1 LOC101929280 MIR4717 HS3ST6 TBC1D24 BRICD5 LOC105371045 SPSB3 AXIN1 TRAF7 MIR3178 PGP TMEM8A HBQ1 MIR3176 ERVK13-1 C16orf91 CHTF18 LINC00235 WDR24 WASIR2 RAB40C C1QTNF8 TPSG1 RGS11 PTX4 LMF1 RHBDL1 HAGH MAPK8IP3 SLC9A3R2 MIR6859-4 MIR6767 FBXL16 RPUSD1 ARHGDIG KCTD5 HBA2 LOC105371046 NPW LOC105371049 WFIKKN1 LOC100287175 PRR35 POLR3K HBA1 SYNGR3 MIR3177 DNASE1L2 SNORA10 CCNF LOC106660606 RNF151 SSTR5-AS1 AMDHD2 RPS2 RAB26 DECR2 ZNF598 SSTR5
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NPW GFER LOC105371049 NOXO1 RPL3L TBL3 PKD1 MIR4516 SNORA64 SNHG9 MSRB1 TSC2 MIR6511B1 SNORA78 SYNGR3 NTHL1 SLC9A3R2 SNORA10 HS3ST6 RNF151 MIR1225 RPS2 NDUFB10 ZNF598
nsv833120 Chr.16:1893102 - 1980660 on Build GRCh38 Loss SNORA10 HS3ST6 NOXO1 RPL3L RNF151 TBL3 SNORA64 RPS2 SNHG9 MSRB1 NDUFB10 SNORA78
nsv519366 Chr.16:1851210 - 1961125 on Build GRCh38 Loss LINC00254 HS3ST6 RPL3L MEIOB MSRB1 NDUFB10

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Function(s) Process(es)


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