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See other LMNTD2 CNV Assays ›
Gene Symbol
LMNTD2
Assay Reference Genome
Location

Chr.11:556582 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00443657_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 256329

Gene Name:

 lamin tail domain containing 2

Gene Aliases:

 C11orf35

Location:

 Chr.11:554850-560780 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMNTD2 NM_173573.2 NP_775844.2
XM_011519965.2 XP_011518267.2
XM_011519967.2 XP_011518269.2
XM_017017476.1 XP_016872965.1
XM_017017477.1 XP_016872966.1
XM_017017478.1 XP_016872967.1
XM_017017479.1 XP_016872968.1
AI539379.1
BC039077.1 AAH39077.1
BX384084.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss RASSF7 LOC143666 LMNTD2 LOC101059906 PHRF1 MIR210 IRF7 HRAS LRRC56 MIR210HG CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RASSF7 PTDSS2 IFITM2 RNH1 LMNTD2 PHRF1 B4GALNT4 LRRC56 IFITM5 MIR210HG CDHR5 ANO9 LOC143666 LOC101059906 IFITM1 MIR210 IFITM3 SIGIRR PGGHG IRF7 HRAS PKP3
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion RASSF7 SCT LOC143666 LMNTD2 LOC101059906 PHRF1 MIR210 IRF7 HRAS LRRC56 MIR210HG CDHR5
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss POLR2L CHID1 RNH1 LMNTD2 LOC101927503 PHRF1 SLC25A22 TALDO1 MUC5B TMEM80 MIR210HG CDHR5 ANO9 PDDC1 DEAF1 SCT LOC101059906 MUC2 CEND1 SIGIRR MIR6744 PANO1 IRF7 MUC6 PKP3 RASSF7 PTDSS2 RPLP2 TSPAN4 PNPLA2 EPS8L2 CD151 DRD4 B4GALNT4 LRRC56 LOC171391 TOLLIP LOC143666 CRACR2B MUC5AC MIR210 AP2A2 SNORA52 PIDD1 HRAS
esv3625070 Chr.11:553728 - 559392 on Build GRCh38 Loss LMNTD2 LRRC56
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss POLR2L CHID1 RNH1 LMNTD2 LOC101927503 PHRF1 SLC25A22 TALDO1 MUC5B TOLLIP-AS1 TMEM80 MIR210HG CDHR5 ANO9 PDDC1 DEAF1 SCT LOC101059906 MUC2 CEND1 SIGIRR MIR6744 PANO1 IRF7 MUC6 RASSF7 PTDSS2 RPLP2 TSPAN4 PNPLA2 EPS8L2 CD151 DRD4 LRRC56 LOC171391 TOLLIP LOC143666 CRACR2B MUC5AC MIR210 AP2A2 SNORA52 PIDD1 HRAS
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain RASSF7 LMNTD2 PHRF1 DRD4 LRRC56 MIR210HG CDHR5 DEAF1 SCT LOC143666 MIR210 IRF7 HRAS
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion POLR2L CHID1 RNH1 LMNTD2 PHRF1 SLC25A22 TALDO1 TMEM80 MIR210HG CDHR5 ANO9 PDDC1 DEAF1 SCT LOC101059906 CEND1 SIGIRR PANO1 IRF7 PKP3 RASSF7 PTDSS2 RPLP2 TSPAN4 PNPLA2 EPS8L2 CD151 DRD4 B4GALNT4 LRRC56 LOC171391 LOC143666 CRACR2B MIR210 AP2A2 SNORA52 PIDD1 HRAS
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain RASSF7 PTDSS2 RNH1 LMNTD2 PHRF1 DRD4 LRRC56 MIR210HG CDHR5 DEAF1 SCT LOC143666 LOC101059906 MIR210 IRF7 HRAS
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion POLR2L CHID1 RNH1 LMNTD2 PHRF1 SLC25A22 TALDO1 TMEM80 MIR210HG CDHR5 PDDC1 DEAF1 SCT LOC101059906 CEND1 PANO1 IRF7 RASSF7 PTDSS2 RPLP2 TSPAN4 PNPLA2 EPS8L2 CD151 DRD4 LRRC56 LOC171391 LOC143666 CRACR2B MIR210 SNORA52 PIDD1 HRAS
nsv469924 Chr.11:549119 - 609887 on Build GRCh38 Gain RASSF7 LOC143666 LMNTD2 PHRF1 MIR210 LRRC56 MIR210HG

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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