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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7689067 on build GRCh38
Cytoband
19p13.2
Assay ID Hs00468701_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 10 1173 NP_001193948.2
NM_001220500.1 11 1309 NP_001207429.1
NM_002002.4 11 1305 NP_001993.2
XM_005272462.4 11 1910 XP_005272519.1
AK223207.1 11 1274 BAD96927.1
AK310071.1 10 1454
BC014108.2 11 1270 AAH14108.1
BC062591.1 11 1263 AAH62591.1
DB333832.1
M14766.1 11 1277 AAA52435.1
M15059.1 11 1305 AAA52434.1
X04772.1 11 1305 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion TRAPPC5 RETN MCEMP1 FCER2
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss PCP2 TRAPPC5 CLEC4G RETN MCEMP1 CAMSAP3 MIR6792 PET100 FCER2 STXBP2 XAB2
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain C19orf45 PCP2 TRAPPC5 CD209 RETN CAMSAP3 CLEC4GP1 PEX11G ZNF358 PET100 STXBP2 LOC100128573 LOC107985283 CLEC4M PNPLA6 INSR CLEC4G MCEMP1 EVI5L MIR6792 ARHGEF18 MCOLN1 FCER2 XAB2
esv2718099 Chr.19:7688726 - 7689169 on Build GRCh38 Deletion FCER2
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain CLEC4M TRAPPC5 CD209 CLEC4G MCEMP1 CLEC4GP1 EVI5L FCER2 PRR36
esv2405737 Chr.19:7688748 - 7689152 on Build GRCh38 Deletion FCER2
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain C19orf45 PCP2 CD209 RETN CAMSAP3 ADGRE1 PEX11G LOC729458 LOC100128573 CLEC4M CLEC4G MBD3L5 MIR6792 ZNF557 TRAPPC5 CLEC4GP1 ZNF358 PET100 STXBP2 LOC107985283 MBD3L2 PNPLA6 ADGRE4P INSR FLJ25758 MCEMP1 ARHGEF18 MCOLN1 FCER2 MBD3L3 XAB2 MBD3L4
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain CLEC4M TRAPPC5 CD209 CLEC4G RETN MCEMP1 FCER2

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More Information


Additional Information:

For this assay, SNP(s) [rs72558005] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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