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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7689067 on build GRCh38
Cytoband
19p13.2
Assay ID Hs00468701_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 10 1173 NP_001193948.2
NM_001220500.1 11 1309 NP_001207429.1
NM_002002.4 11 1305 NP_001993.2
XM_005272462.4 11 1910 XP_005272519.1
AK223207.1 11 1274 BAD96927.1
AK310071.1 10 1454
BC014108.2 11 1270 AAH14108.1
BC062591.1 11 1263 AAH62591.1
DB333832.1
M14766.1 11 1277 AAA52435.1
M15059.1 11 1305 AAA52434.1
X04772.1 11 1305 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion TRAPPC5 FCER2 RETN MCEMP1
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss MIR6792 TRAPPC5 FCER2 RETN XAB2 CLEC4G MCEMP1 STXBP2 PCP2 CAMSAP3 PET100
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain ARHGEF18 MIR6792 TRAPPC5 INSR MCOLN1 FCER2 RETN ZNF358 XAB2 CD209 CLEC4M LOC107985283 PET100 CLEC4GP1 CLEC4G EVI5L MCEMP1 STXBP2 PCP2 CAMSAP3 C19orf45 LOC100128573 PEX11G PNPLA6
esv2718099 Chr.19:7688726 - 7689169 on Build GRCh38 Deletion FCER2
esv2405737 Chr.19:7688748 - 7689152 on Build GRCh38 Deletion FCER2
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain TRAPPC5 PRR36 FCER2 CLEC4G CD209 CLEC4M EVI5L MCEMP1 CLEC4GP1
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain INSR MCOLN1 FCER2 ZNF358 ADGRE4P MBD3L4 FLJ25758 MBD3L5 MBD3L2 CLEC4GP1 CLEC4G STXBP2 PCP2 C19orf45 ARHGEF18 MIR6792 TRAPPC5 RETN XAB2 CD209 CLEC4M MBD3L3 LOC107985283 LOC729458 PET100 ADGRE1 ZNF557 MCEMP1 CAMSAP3 LOC100128573 PEX11G PNPLA6
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain TRAPPC5 FCER2 RETN CLEC4G CD209 CLEC4M MCEMP1

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More Information


Additional Information:

For this assay, SNP(s) [rs72558005] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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