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Gene Symbol
FAAP20
Assay Reference Genome
Location

Chr.1:2193861 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00478631_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 199990

Gene Name:

 Fanconi anemia core complex associated protein 20

Gene Aliases:

 C1orf86, FP7162

Location:

 Chr.1:2184460-2212720 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAAP20 NM_001146310.1 7 1008 NP_001139782.1
NM_001256945.1 2 138 NP_001243874.1
NM_001256946.1 3 274 NP_001243875.1
NM_001256947.1 2 138 NP_001243876.1
NM_001282670.1 7 3120 NP_001269599.1
NM_001282671.1 3 274 NP_001269600.1
NM_001282672.1 3 274 NP_001269601.1
NM_001282673.1 3 274 NP_001269602.1
NM_182533.2 3 274 NP_872339.2
NR_046427.1 2 138
XM_006710419.3 4 859 XP_006710482.1
XM_006710421.3 3 249 XP_006710484.1
XM_011540914.2 8 810 XP_011539216.1
XM_011540921.2 5 659 XP_011539223.1
XM_011540922.1 3 273 XP_011539224.1
XM_017000553.1 6 657 XP_016856042.1
XM_017000554.1 3 249 XP_016856043.1
XM_017000557.1 2 143 XP_016856046.1
AF461903.1 3 2088 AAQ04817.1
AF469129.1 3 240 AAP97719.1
AK055593.1 3 274 BAB70965.1
AK126870.1 7 3119 BAC86730.1
AK127994.1 7 1008 BAC87220.1
AL545931.3 2 101
BC066360.1 3 271 AAH66360.1
BC103992.2 3 274 AAI03993.1
BG825658.1 3 255
BU192678.1 2 99
BU542153.1 2 99
BU626113.1 2 472
CN397640.1 2 117
DA596011.1 3 274

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv461727 Chr.1:2151050 - 2251031 on Build GRCh38 Loss LOC100506504 FAAP20 PRKCZ SKI LOC105378592
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6859-1 MMP23A LOC100133331 CPTP TMEM52 MTND1P23 LINC00115 VWA1 LOC105378949 LINC01128 NOC2L MIR1302-2 ATAD3C LOC105378592 MIR200A SCNN1D SKI FNDC10 LOC102724312 TTLL10 GABRD B3GALT6 ANKRD65 ACAP3 PRKCZ TNFRSF18 LOC100130417 CFAP74 FAM138A PUSL1 LOC100288069 OR4F29 LOC107985729 LINC01342 LOC100132287 LOC105378589 ATAD3A DVL1 NADK LOC100134822 MIR6808 WASH7P MIB2 MRPL20 CDK11A ATAD3B MIR6859-2 MORN1 PERM1 MMP23B FAM41C TMEM88B MIR6723 LOC105378947 C1orf159 LOC101928626 FAAP20 CALML6 UBE2J2 SSU72 LOC107984841 MIR429 CDK11B DDX11L1 LOC729737 LOC100506504 LOC102725121 OR4F16 LOC284600 PLEKHN1 AURKAIP1 TNFRSF4 LOC148413 HES4 TMEM240 KLHL17 SAMD11 LOC100288175 MIR6726 LOC107985728 TAS1R3 LOC105378948 LOC100287934 TTLL10-AS1 CCNL2 MIR6727 LOC100129534 SDF4 SLC35E2B FAM132A SLC35E2 MIR200B FAM87B MTND2P28 LOC105378591 OR4F5 AGRN CPSF3L ISG15 GNB1 RNF223 MXRA8
nsv951530 Chr.1:2153662 - 2229961 on Build GRCh38 Deletion LOC100506504 FAAP20 PRKCZ SKI LOC105378592
nsv470682 Chr.1:2188394 - 2378754 on Build GRCh38 Loss MORN1 FAAP20 SKI LOC100129534 LOC105378592
nsv834557 Chr.1:2117631 - 2311104 on Build GRCh38 Loss LOC100506504 FAAP20 PRKCZ SKI LOC105378592

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