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See other GTF2H4 CNV Assays ›
Gene Symbol
GTF2H4
Assay Reference Genome
Location

Chr.6:30910931 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00520343_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2968

Gene Name:

 general transcription factor IIH subunit 4

Gene Aliases:

 P52, TFB2, TFIIH

Location:

 Chr.6:30908200-30914103 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GTF2H4 NM_001517.4 NP_001508.1
AK222607.1 BAD96327.1
AK298058.1
AK300239.1
AK309869.1
BC004935.1 AAH04935.1
BC016302.2 AAH16302.1
BI460355.1
BT007321.1 AAP35985.1
Y07595.1 CAA68870.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion OR14J1 MICA IER3 ZNRD1 TRIM39 TRIM39-RPP21 HLA-F OR11A1 HCG9 TCF19 HCG17 LOC101929006 ABCF1 UBD DHX16 PSORS1C2 SNORD32B C6orf136 ZNRD1ASP OR10C1 IFITM4P LINC01015 FLOT1 NRM MDC1 TRIM40 HCG27 DDR1 TRIM15 GABBR1 GNL1 HLA-B HCG4B HCG18 RPP21 MIR6891 TUBB MDC1-AS1 OR2H1 VARS2 TRIM26 PPP1R10 OR2H2 C6orf15 ZFP57 PPP1R11 TRIM31 POU5F1 DPCR1 HLA-A MAS1L HCG8 SFTA2 OR12D2 OR2J2 MUC22 MUC21 OR12D3 TRIM10 PRR3 OR5V1 TRIM31-AS1 PSORS1C3 HLA-L MOG HLA-E PSORS1C1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 HCG4 ATAT1 MIR877 HLA-K MIR4640 HCG22 PPP1R18 HLA-J HLA-F-AS1 HLA-G CDSN GTF2H4 HLA-C HLA-H RNF39 LOC554223
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss SFTA2 IER3 MUC22 MUC21 TCF19 ABCF1 DHX16 PSORS1C2 PRR3 C6orf136 PSORS1C3 FLOT1 NRM MDC1 HCG27 DDR1 HLA-E PSORS1C1 GNL1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 ATAT1 MIR877 TUBB MDC1-AS1 VARS2 PPP1R10 MIR4640 HCG22 C6orf15 PPP1R18 CDSN GTF2H4 POU5F1 HLA-C DPCR1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion OR14J1 IER3 ZNRD1 TRIM39 HCG16 LINC01556 ZNF311 TRIM39-RPP21 HLA-F OR11A1 HCG9 TCF19 HCG17 LOC101929006 ABCF1 UBD DHX16 PSORS1C2 SNORD32B C6orf136 ZNRD1ASP OR10C1 IFITM4P LINC01015 FLOT1 NRM MDC1 TRIM40 HCG27 DDR1 TRIM15 GABBR1 GNL1 HCG4B HCG18 RPP21 TUBB MDC1-AS1 OR2H1 VARS2 TRIM26 PPP1R10 OR2W1 OR2H2 C6orf15 ZFP57 LINC00533 PPP1R11 TRIM31 POU5F1 DPCR1 HLA-A LINC01623 MAS1L HCG8 SFTA2 OR12D2 OR2J2 MUC22 MUC21 OR12D3 TRIM10 PRR3 OR5V1 OR2J3 TRIM31-AS1 PSORS1C3 HLA-L MOG HLA-E HCG14 PSORS1C1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 HCG4 ATAT1 MIR877 HLA-K TRIM27 MIR4640 HCG22 OR2B3 PPP1R18 HLA-J HLA-F-AS1 HLA-G CDSN GTF2H4 HLA-H RNF39 LOC554223 LOC100129636
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion IER3 ZNRD1 TRIM39 TRIM39-RPP21 HLA-F HCG9 TCF19 HCG17 ABCF1 DHX16 PSORS1C2 C6orf136 ZNRD1ASP IFITM4P FLOT1 NRM MDC1 TRIM40 HCG27 DDR1 TRIM15 GNL1 HCG4B HCG18 RPP21 TUBB MDC1-AS1 VARS2 TRIM26 PPP1R10 C6orf15 PPP1R11 TRIM31 POU5F1 DPCR1 HLA-A HCG8 SFTA2 MUC22 MUC21 TRIM10 PRR3 TRIM31-AS1 PSORS1C3 HLA-L HLA-E PSORS1C1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 HCG4 ATAT1 MIR877 HLA-K MIR4640 HCG22 PPP1R18 HLA-J HLA-F-AS1 HLA-G CDSN GTF2H4 HLA-C HLA-H RNF39 LOC554223
esv3608518 Chr.6:30889700 - 30987504 on Build GRCh38 Gain SFTA2 DDR1 GTF2H4 MUC21 DPCR1 VARS2 MIR4640
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss IER3 ZNRD1 TRIM39 TRIM39-RPP21 HCG9 TCF19 HCG17 ABCF1 DHX16 PSORS1C2 C6orf136 ZNRD1ASP FLOT1 NRM MDC1 TRIM40 HCG27 DDR1 TRIM15 GNL1 HCG4B HCG18 RPP21 TUBB MDC1-AS1 VARS2 TRIM26 PPP1R10 C6orf15 PPP1R11 TRIM31 POU5F1 DPCR1 HLA-A HCG8 SFTA2 MUC22 MUC21 TRIM10 PRR3 TRIM31-AS1 PSORS1C3 HLA-L HLA-E PSORS1C1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 ATAT1 MIR877 HLA-K MIR4640 HCG22 PPP1R18 HLA-J CDSN GTF2H4 HLA-C HLA-H RNF39
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion SFTA2 IER3 MUC22 MUC21 TCF19 ABCF1 DHX16 PSORS1C2 PRR3 C6orf136 PSORS1C3 FLOT1 NRM MDC1 HCG27 DDR1 HLA-E PSORS1C1 GNL1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 ATAT1 MIR877 TUBB MDC1-AS1 VARS2 PPP1R10 MIR4640 HCG22 C6orf15 PPP1R18 CDSN GTF2H4 POU5F1 HLA-C DPCR1
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion SFTA2 IER3 MUC22 MUC21 ABCF1 DHX16 PRR3 C6orf136 FLOT1 NRM MDC1 DDR1 GNL1 HCG20 LOC105375014 MRPS18B LINC00243 ATAT1 MIR877 TUBB MDC1-AS1 VARS2 PPP1R10 MIR4640 HCG22 PPP1R18 GTF2H4 DPCR1
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication MICA IER3 ZNRD1 TRIM39 TRIM39-RPP21 TCF19 HCG17 ABCF1 DHX16 PSORS1C2 C6orf136 ZNRD1ASP FLOT1 NRM MDC1 TRIM40 HCG27 DDR1 TRIM15 GNL1 HLA-B HCG18 RPP21 MIR6891 TUBB MDC1-AS1 VARS2 TRIM26 PPP1R10 C6orf15 PPP1R11 TRIM31 POU5F1 DPCR1 LOC102725068 HCG8 SFTA2 MUC22 MUC21 TRIM10 PRR3 TRIM31-AS1 PSORS1C3 HLA-L HLA-E PSORS1C1 CCHCR1 HCG20 LOC105375014 MRPS18B LINC00243 ATAT1 MIR877 MIR4640 HCP5 HCG22 PPP1R18 HLA-J CDSN GTF2H4 HLA-C RNF39 HCG26
nsv525438 Chr.6:30897052 - 30966198 on Build GRCh38 Gain SFTA2 DDR1 GTF2H4 DPCR1 VARS2
nsv1031677 Chr.6:30889765 - 31005088 on Build GRCh38 Gain SFTA2 DDR1 GTF2H4 MUC21 DPCR1 VARS2 MIR4640

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