Hs00542429_cn

• Gene Symbol: RHNO1
• Assay Reference Genome Location: Chr.12:2888974 on build GRCh38
• Cytoband: 12p13.33

Target Gene Details

• Entrez Gene ID: 83695
• Gene Name: RAD9-HUS1-RAD1 interacting nuclear orphan 1
• Gene Aliases: C12orf32, HKMT1188, RHINO
• Location: Chr.12:2876258-2889525 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RHNO1	NM_001252499.2	3	1400	NP_001239428.1
	NM_001252500.2	3	1358	NP_001239429.1
	NM_001257097.1	3	1521	NP_001244026.1
	NM_001257098.1	3	1420	NP_001244027.1
	NR_027365.2	2	1148
	NR_046432.1	4	1534
	NR_046433.1	2	1322
	AB073599.1	3	1376	BAD38639.1
	AK021945.1	2	1124
	AK304613.1	3	1334

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3628321	Chr.12:2796341 - 2902786 on Build GRCh38	Gain	LOC100507424 LOC101929469 NRIP2 RHNO1 TULP3 FOXM1 FKBP4 ITFG2
esv3628326	Chr.12:2888954 - 2950527 on Build GRCh38	Gain	RHNO1 TULP3
dgv19n68	Chr.12:2726070 - 2935438 on Build GRCh38	Loss	LOC100507424 LOC101929469 NRIP2 RHNO1 TULP3 LOC283440 FOXM1 FKBP4 ITFG2
nsv832311	Chr.12:2810344 - 2996539 on Build GRCh38	Loss	LOC100507424 LOC101929469 NRIP2 RHNO1 TULP3 TEAD4 FOXM1 ITFG2

More Information

Additional Information:

For this assay, SNP(s) [rs78731201] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

DNA damage checkpoint
recombinational repair
DNA replication
cellular response to UV
positive regulation of G0 to G1 transition
cellular response to ionizing radiation
regulation of signal transduction by p53 class mediator

Function(s)

protein binding