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Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2037590 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00549541_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371046 HN1L CCNF FAM173A FAM234A LOC101929280 PDIA2 POLR3K CCDC78 ZNF598 WDR90 NPW JMJD8 SNORD60 WDR24 PRSS29P CASKIN1 RNPS1 NTN3 MCRIP2 ABCA3 MIR6511B1 LOC105371045 TMEM8A WFIKKN1 PRSS27 CCDC154 KCTD5 LUC7L FAHD1 METTL26 TSC2 TELO2 STUB1 RAB26 C1QTNF8 PRR35 SNRNP25 AXIN1 RPS2 MIR3677 LINC00254 RHBDL1 LOC105371047 MIR662 CRAMP1 TMEM204 MIR3180-5 RHBDF1 RHOT2 LMF1-AS1 HAGH ERVK13-1 MIR5587 BRICD5 LOC107984876 MIR4717 MIR4516 NME4 LMF1 CAPN15 FBXL16 SSTR5-AS1 LOC105371184 DECR2 C16orf91 MSRB1 TSR3 SNORA10 PGP ECI1 SLC9A3R2 GFER RAB11FIP3 NHLRC4 GNPTG RGS11 IFT140 SOX8 SNORA64 ATP6V0C ARHGDIG CACNA1H CLCN7 LOC100287175 NME3 MIR3178 HBA1 SYNGR3 UNKL RNF151 BAIAP3 AMDHD2 CEMP1 MAPK8IP3 C16orf59 LOC106660606 FLJ42627 UBE2I HS3ST6 DDX11L10 PRR25 GNG13 MLST8 WASIR2 TPSB2 LOC652276 MIR3177 MIR1225 MIR6859-4 E4F1 NOXO1 SNORA78 MIR6767 HBM METRN PDPK1 PKD1 MEIOB SNHG9 NARFL LOC100134368 RAB40C RPUSD1 TBC1D24 NPRL3 NUBP2 NDUFB10 LOC105371038 ABCA17P HBZ PIGQ HBA2 LOC107987233 LOC105371049 CHTF18 MIR3176 SPSB3 IGFALS DNASE1L2 NTHL1 SNHG19 MRPS34 MIR6768 MRPL28 LOC729652 MSLN MIR940 RPL3L LINC00235 PTX4 TBL3 TPSAB1 SSTR5 HAGHL HBQ1 RPL23AP5 TPSG1 MPG TRAF7 EME2 TPSD1
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss SYNGR3 ZNF598 TBL3 NPW SLC9A3R2 NTHL1 TSC2 GFER NOXO1
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNORA78 SYNGR3 MSRB1 RPL3L RPS2 RNF151 TBL3 SNORA10 MIR6511B1 SLC9A3R2 GFER PKD1 SNHG9 SNORA64 LOC105371049 HS3ST6 ZNF598 NPW MIR4516 NTHL1 TSC2 NDUFB10 MIR1225 NOXO1
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNORA78 SYNGR3 RPS2 RNF151 TBL3 SNORA10 SLC9A3R2 GFER SNHG9 SNORA64 ZNF598 NPW NDUFB10 NOXO1
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNORA78 SYNGR3 RPS2 RNF151 TBL3 SNORA10 MIR6511B1 SLC9A3R2 GFER PKD1 SNHG9 SNORA64 LOC105371049 ZNF598 NPW NTHL1 TSC2 NDUFB10 MIR1225 NOXO1
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SNORA78 SYNGR3 ZNF598 RNF151 TBL3 NPW SLC9A3R2 GFER NOXO1 SNHG9
nsv457348 Chr.16:2004154 - 2037561 on Build GRCh38 Loss ZNF598 NPW SLC9A3R2
dgv779e212 Chr.16:2037225 - 2038968 on Build GRCh38 Loss SLC9A3R2

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