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Gene Symbol
SLC9A3R2
Assay Reference Genome
Location

Chr.16:2037590 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00549541_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9351

Gene Name:

 SLC9A3 regulator 2

Gene Aliases:

 E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1

Location:

 Chr.16:2026868-2039026 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3R2 NM_001130012.2 NP_001123484.1
NM_001252073.1 NP_001239002.1
NM_001252075.1 NP_001239004.1
NM_001252076.1 NP_001239005.1
NM_004785.5 NP_004776.3
XM_005255702.4 XP_005255759.1
XM_006720981.1 XP_006721044.1
XM_017023894.1 XP_016879383.1
XM_017023895.1 XP_016879384.1
AF004900.1 AAC63061.1
AF035771.1 AAC52090.1
BC014513.1 AAH14513.2
BC069014.1 AAH69014.1
BC106001.1 AAI06002.1
BQ687174.1
BX377861.2
CB961565.1
U82108.1 AAB53042.1
Z50150.1 CAA90511.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC107984876 MRPL28 AXIN1 WDR24 KCTD5 NUBP2 MSLN MAPK8IP3 HBA1 CEMP1 LOC107987233 GNPTG SNHG19 WDR90 CASKIN1 LOC105371184 RNF151 ZNF598 TBC1D24 ABCA17P SSTR5-AS1 DNASE1L2 NARFL MIR3177 RPL23AP5 HN1L NME3 JMJD8 SOX8 MCRIP2 TRAF7 RAB40C PKD1 LOC105371049 BAIAP3 CLCN7 MIR6768 CCDC154 RPS2 C16orf91 RPL3L NHLRC4 FAM234A ATP6V0C LOC100287175 HAGHL CCNF LUC7L TPSD1 NOXO1 WFIKKN1 SNORD60 UNKL RGS11 MIR1225 RPUSD1 HS3ST6 SSTR5 LOC105371038 PTX4 LINC00254 FAM173A TSC2 LOC652276 TMEM204 ERVK13-1 PDPK1 NPW HBQ1 RNPS1 HBA2 SNORA10 MIR4516 MEIOB TPSAB1 NDUFB10 LOC100134368 RHBDF1 PRSS29P MIR3176 C1QTNF8 LMF1 MIR3180-5 ABCA3 E4F1 MIR6767 TPSB2 LOC106660606 RHBDL1 TELO2 HBZ HAGH WASIR2 TSR3 LOC729652 EME2 MIR3178 SPSB3 CAPN15 LINC00235 CCDC78 MRPS34 NTN3 MIR6511B1 PDIA2 MLST8 LOC101929280 AMDHD2 STUB1 SYNGR3 RAB11FIP3 BRICD5 LMF1-AS1 MSRB1 MIR940 SNORA78 PIGQ CRAMP1 SNORA64 SLC9A3R2 NPRL3 FAHD1 PGP TBL3 FBXL16 FLJ42627 IGFALS RHOT2 CACNA1H MIR4717 PRR35 C16orf59 SNRNP25 RAB26 MIR6859-4 POLR3K HBM METRN IFT140 GNG13 DECR2 PRR25 TPSG1 CHTF18 NTHL1 MIR662 LOC105371046 UBE2I LOC105371047 DDX11L10 METTL26 GFER ARHGDIG MIR3677 PRSS27 MIR5587 LOC105371045 SNHG9 MPG ECI1 NME4 TMEM8A
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss MIR4717 NOXO1 SNORD60 RAB26 MIR1225 TSC2 MIR6511B1 MLST8 NPW SNHG19 CASKIN1 RNPS1 NTHL1 ZNF598 SYNGR3 MIR4516 BRICD5 DNASE1L2 MIR940 GFER MIR3677 TRAF7 PKD1 LOC105371049 SLC9A3R2 MIR3180-5 ABCA3 E4F1 LOC106660606 PGP TBL3 ECI1
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNORA78 NDUFB10 NOXO1 GFER SNORA64 SLC9A3R2 SNHG9 NPW RPS2 TBL3 RNF151 ZNF598 SNORA10 SYNGR3
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR4516 MSRB1 SNORA78 NDUFB10 NOXO1 GFER MIR1225 HS3ST6 PKD1 LOC105371049 SNORA64 SLC9A3R2 TSC2 SNHG9 MIR6511B1 NPW RPS2 NTHL1 TBL3 RPL3L RNF151 ZNF598 SNORA10 SYNGR3
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNORA78 NDUFB10 NOXO1 GFER MIR1225 PKD1 LOC105371049 SNORA64 SLC9A3R2 TSC2 SNHG9 MIR6511B1 NPW RPS2 NTHL1 TBL3 RNF151 ZNF598 SNORA10 SYNGR3
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SLC9A3R2 SNORA78 SNHG9 NOXO1 NPW GFER TBL3 RNF151 ZNF598 SYNGR3
nsv571189 Chr.16:2004154 - 2037561 on Build GRCh38 Loss SLC9A3R2 NPW ZNF598
dgv779e212 Chr.16:2037225 - 2038968 on Build GRCh38 Loss SLC9A3R2

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