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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1302010 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00553084_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
AK098490.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D UBE2J2 MIR6726 ACAP3
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC101928626 B3GALT6 LOC284600 LOC148413 MMP23B OR4F29 LOC100134822 MIR1302-2 LOC107985729 AURKAIP1 LOC105378949 LINC01342 TMEM88B MTND2P28 FAAP20 MIR429 MIR6808 MIR200A LOC107984841 CPSF3L WASH7P FAM87B LOC100288069 MRPL20 LOC100287934 CFAP74 TTLL10 DDX11L1 LOC100132287 CPTP AGRN CCNL2 LINC01128 LOC100130417 GNB1 TNFRSF4 KLHL17 LOC100129534 LOC105378948 ATAD3C FNDC10 GABRD ANKRD65 FAM41C SAMD11 MORN1 SLC35E2B ATAD3B LOC105378589 LOC105378592 SLC35E2 MIR6859-1 ATAD3A CDK11A LOC100288175 SDF4 HES4 TMEM52 LINC00115 MMP23A CALML6 LOC102725121 RNF223 PERM1 NOC2L SSU72 MIB2 MXRA8 LOC107985728 LOC102724312 MIR200B ACAP3 OR4F5 UBE2J2 LOC105378591 MIR6727 TAS1R3 MIR6726 CDK11B FAM132A FAM138A PLEKHN1 LOC100133331 DVL1 SKI VWA1 LOC105378947 NADK MIR6723 PUSL1 PRKCZ LOC100506504 TMEM240 MTND1P23 TTLL10-AS1 SCNN1D ISG15 LOC729737 TNFRSF18 OR4F16 C1orf159 MIR6859-2
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SDF4 SCNN1D UBE2J2 MIR6726 FAM132A ACAP3 B3GALT6
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss CPTP MIR6808 MIR6727 TAS1R3 PUSL1 MIR6726 DVL1 CPSF3L ACAP3
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D MIR6726 ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss RNF223 TNFRSF4 LINC01342 MIR200B ACAP3 B3GALT6 TTLL10 TTLL10-AS1 SDF4 SCNN1D UBE2J2 MIR429 MIR200A TNFRSF18 MIR6726 FAM132A C1orf159
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss MXRA8 CPTP MIR6808 MIR6727 TAS1R3 PUSL1 DVL1 CPSF3L ACAP3
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication RNF223 MIR200B ACAP3 B3GALT6 TTLL10 LOC100288175 SDF4 UBE2J2 CPTP AGRN MIR6727 TAS1R3 MIR6726 FAM132A TNFRSF4 LINC01342 LOC105378948 PUSL1 TTLL10-AS1 SCNN1D MIR429 MIR200A TNFRSF18 CPSF3L C1orf159
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion AURKAIP1 SCNN1D MXRA8 CPTP MIR6808 MIR6727 TAS1R3 PUSL1 MIR6726 DVL1 CPSF3L ACAP3
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SLC35E2B ATAD3B SLC35E2 ATAD3A CDK11A B3GALT6 LOC100288175 SDF4 LOC284600 LOC148413 HES4 MMP23B LOC107985729 AURKAIP1 LINC01342 LINC00115 MMP23A TMEM88B MIR429 MIR6808 MIR200A CPSF3L FAM87B RNF223 PERM1 NOC2L SSU72 MIB2 LOC100288069 MXRA8 LOC107985728 MRPL20 LOC102724312 LOC100287934 MIR200B ACAP3 TTLL10 UBE2J2 CPTP AGRN CCNL2 MIR6727 TAS1R3 LINC01128 LOC100130417 MIR6726 CDK11B FAM132A PLEKHN1 DVL1 VWA1 TNFRSF4 KLHL17 LOC105378948 NADK PUSL1 ATAD3C FNDC10 ANKRD65 TMEM240 TTLL10-AS1 FAM41C SAMD11 SCNN1D ISG15 TNFRSF18 C1orf159
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ATAD3B SSU72 MIB2 MXRA8 MRPL20 LOC102724312 ATAD3A MIR200B ACAP3 B3GALT6 TTLL10 SDF4 UBE2J2 CPTP CCNL2 LOC148413 MIR6727 MMP23B TAS1R3 MIR6726 CDK11B FAM132A DVL1 LOC107985729 AURKAIP1 VWA1 TNFRSF4 LINC01342 PUSL1 ATAD3C TMEM88B FNDC10 ANKRD65 TMEM240 TTLL10-AS1 SCNN1D MIR429 MIR6808 MIR200A TNFRSF18 CPSF3L C1orf159
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain SCNN1D MXRA8 CPTP MIR6808 MIR6727 TAS1R3 PUSL1 MIR6726 DVL1 CPSF3L ACAP3
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss AURKAIP1 MXRA8 PUSL1 ACAP3 SCNN1D UBE2J2 CPTP MIR6808 MIR6727 TAS1R3 MIR6726 DVL1 CPSF3L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain RNF223 PERM1 NOC2L MXRA8 LOC107985728 MRPL20 MIR200B ACAP3 B3GALT6 TTLL10 LOC100288175 SDF4 UBE2J2 LOC284600 CPTP AGRN CCNL2 LOC148413 HES4 MIR6727 TAS1R3 LOC100130417 MIR6726 FAM132A PLEKHN1 DVL1 AURKAIP1 TNFRSF4 KLHL17 LINC01342 LOC105378948 PUSL1 TMEM88B ANKRD65 TTLL10-AS1 SAMD11 SCNN1D ISG15 MIR429 MIR6808 MIR200A TNFRSF18 CPSF3L C1orf159
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TNFRSF4 PUSL1 MIR200B ACAP3 B3GALT6 TTLL10 TTLL10-AS1 SDF4 SCNN1D UBE2J2 MIR429 MIR200A MIR6727 TNFRSF18 MIR6726 FAM132A CPSF3L

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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