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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88877183 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00554396_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 12 2044 NP_005178.4
NM_175931.2 11 1710 NP_787127.1
XM_005256323.4 11 2022 XP_005256380.1
AB010419.1 12 1913 BAA29061.1
AB010420.1 11 1710 BAA29062.1
AK090985.1 3 722
AK097904.1 2 860
AK314766.1 12 1899
BC047019.1 12 1894
BC062624.1 12 1914 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 LOC105371409 CBFA2T3 LOC101927793 PABPN1L LOC107987238 APRT CDT1 TRAPPC2L PIEZO1 GALNS
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC100129697 CBFA2T3 MIR4722 LOC100289580 LOC400558 CDH15 PABPN1L LOC339059 ACSF3 ZNF778 APRT CDT1 SLC22A31 GALNS LOC105371409 LOC101927793 LOC107987238 CTU2 LINC00304 TRAPPC2L PIEZO1
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 LOC101927793 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC100129697 CBFA2T3 LOC400558 CDH15 PABPN1L ACSF3 APRT CDT1 SLC22A31 GALNS LOC105371409 LOC101927793 LOC107987238 LINC00304 TRAPPC2L
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100129697 CBFA2T3 LOC100289580 LOC400558 CDH15 LOC105371414 PABPN1L LOC339059 ACSF3 ZNF778 APRT CDT1 SLC22A31 GALNS LOC105371409 LOC101927793 LOC100287036 LOC107987238 LINC00304 TRAPPC2L ANKRD11 PIEZO1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CBFA2T3 LOC101927793 PABPN1L LOC107987238 APRT CDT1 TRAPPC2L PIEZO1 GALNS
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC100129697 CBFA2T3 LOC400558 CDH15 PABPN1L ACSF3 APRT CDT1 GALNS LOC105371409 LOC101927793 LOC107987238 LINC00304 TRAPPC2L
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 LOC105371409 CBFA2T3 LOC101927793 PABPN1L LOC107987238 APRT CDT1 TRAPPC2L GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC100129697 LOC400558 GAS8 FAM157C LOC105371414 APRT LOC101927817 SLC22A31 LOC105371419 DEF8 LOC105371409 RNF166 SPG7 ANKRD11 CENPBD1 PABPN1L LOC339059 ZNF778 MC1R SNORD68 VPS9D1-AS1 LOC107987238 URAHP SPATA33 CDK10 DPEP1 ACSF3 AFG3L1P CDT1 TCF25 SPATA2L MVD LOC101927793 VPS9D1 RPL13 SPIRE2 DBNDD1 SNAI3 TUBB8P7 PIEZO1 CHMP1A CBFA2T3 MIR4722 LOC100289580 CDH15 CYBA TUBB3 IL17C GALNS PRDM7 LOC100287036 LOC107984817 GAS8-AS1 CTU2 LINC00304 SNAI3-AS1 FANCA ZNF276 TRAPPC2L CPNE7
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain CBFA2T3 PABPN1L TRAPPC2L GALNS
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain CBFA2T3 MIR4722 LOC100289580 PABPN1L LOC339059 APRT CDT1 GALNS LOC101927793 LOC107987238 CTU2 TRAPPC2L PIEZO1

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