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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88877183 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00554396_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 12 2044 NP_005178.4
NM_175931.2 11 1710 NP_787127.1
XM_005256323.4 11 2022 XP_005256380.1
AB010419.1 12 1913 BAA29061.1
AB010420.1 11 1710 BAA29062.1
AK090985.1 3 722
AK097904.1 2 860
AK314766.1 12 1899
BC047019.1 12 1894
BC062624.1 12 1914 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS PIEZO1 LOC105371409 LOC101927793 LOC107987238 CDT1 LOC100129697 APRT TRAPPC2L PABPN1L CBFA2T3
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC105371409 LOC400558 LOC101927793 CDH15 LOC100289580 MIR4722 CTU2 LOC100129697 APRT LINC00304 CBFA2T3 LOC339059 GALNS PIEZO1 LOC107987238 ZNF778 CDT1 SLC22A31 TRAPPC2L PABPN1L ACSF3
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion LOC101927793 PABPN1L CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC105371409 LOC400558 LOC101927793 CDH15 LOC100129697 APRT LINC00304 CBFA2T3 GALNS LOC107987238 CDT1 SLC22A31 TRAPPC2L PABPN1L ACSF3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ANKRD11 LOC105371409 LOC400558 LOC101927793 CDH15 LOC100289580 LOC100129697 APRT LINC00304 LOC105371414 CBFA2T3 LOC339059 GALNS PIEZO1 LOC107987238 ZNF778 CDT1 SLC22A31 TRAPPC2L PABPN1L LOC100287036 ACSF3
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS PIEZO1 LOC101927793 LOC107987238 CDT1 APRT TRAPPC2L PABPN1L CBFA2T3
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS LOC105371409 LOC101927793 LOC107987238 CDT1 LOC100129697 APRT TRAPPC2L PABPN1L CBFA2T3
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC105371409 LOC400558 LOC101927793 CDH15 LOC100129697 APRT LINC00304 CBFA2T3 GALNS LOC107987238 CDT1 TRAPPC2L PABPN1L ACSF3
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC101927817 LOC105371409 MIR4722 VPS9D1-AS1 DBNDD1 MC1R CDT1 PABPN1L LOC100287036 SNAI3-AS1 CYBA ANKRD11 CDH15 LOC100129697 CDK10 APRT LOC107984817 LOC105371414 SPATA33 LOC105371419 CENPBD1 TUBB3 GAS8-AS1 TUBB8P7 VPS9D1 CPNE7 TCF25 DEF8 LOC400558 CHMP1A SNAI3 MVD LINC00304 CBFA2T3 PRDM7 GALNS RPL13 SNORD68 LOC107987238 ZNF778 FANCA SPIRE2 GAS8 SPATA2L DPEP1 URAHP LOC101927793 LOC100289580 SPG7 CTU2 ZNF276 IL17C LOC339059 AFG3L1P PIEZO1 FAM157C SLC22A31 TRAPPC2L RNF166 ACSF3
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain GALNS TRAPPC2L PABPN1L CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC105371409 LOC101927793 LOC100289580 MIR4722 CTU2 LOC100129697 APRT CBFA2T3 LOC339059 GALNS PIEZO1 LOC107987238 CDT1 TRAPPC2L PABPN1L

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