Hs00564697_cn

• Gene Symbol: B3GNTL1
• Assay Reference Genome Location: Chr.17:82947004 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 146712
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
• Gene Aliases: 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1
• Location: Chr.17:82942149-83051845 on Build GRCh38
• Assay Gene Location: Within Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNTL1	NM_001009905.2			NP_001009905.1
	NM_001320742.1			NP_001307671.1
	NM_001320743.1			NP_001307672.1
	NR_135465.1	13	1354
	NR_135466.1
	XM_006722272.3			XP_006722335.1
	XM_011523532.2			XP_011521834.1
	XM_011523535.1			XP_011521837.1
	XM_017024205.1			XP_016879694.1
	XM_017024206.1			XP_016879695.1
	AK054757.1
	AK126018.1	1	2945
	AY304503.1			AAQ74775.1
	AY634364.1			AAT47555.1
	BC019623.1			AAH19623.1
	U79265.1	1	1365

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	RAB40B MIR4525 TBCD FOXK2 FN3K FN3KRP LOC105371944 LOC105376791 B3GNTL1 LOC101929552 ZNF750 METRNL WDR45B
dgv3296n100	Chr.17:82851564 - 83091923 on Build GRCh38	Gain	LOC105371944 TBCD B3GNTL1 METRNL
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	DUS1L ACTG1 LRRC45 STRA13 ASPSCR1 MAFG-AS1 LOC105371925 OXLD1 MAFG C17orf89 LOC105376791 MIR6787 LOC101929552 CEP131 LOC105376790 SLC16A3 RFNG SLC38A10 TEPSIN BAHCC1 PYCR1 P4HB MIR6786 TSPAN10 NOTUM AATK FASN PCYT2 NPLOC4 RAC3 CCDC57 CCDC137 WDR45B NARF MCRIP1 MIR4740 SECTM1 TMEM105 DCXR HGS SLC25A10 CSNK1D UTS2R NPB OGFOD3 CD7 LOC105371944 FAAP100 MIR3186 ZNF750 HEXDC RAB40B LOC101929511 MIR4525 TBCD FOXK2 SNORD134 FN3K SIRT7 MRPL12 PDE6G FN3KRP AATK-AS1 GCGR ANAPC11 MYADML2 PPP1R27 ARHGDIA FSCN2 TEX19 ARL16 LOC100130370 B3GNTL1 C17orf62 GPS1 ALYREF LINC00482
nsv576217	Chr.17:82937869 - 82960820 on Build GRCh38	Loss	LOC105371944 TBCD B3GNTL1
nsv529032	Chr.17:82946968 - 82963153 on Build GRCh38	Loss	B3GNTL1
dgv3297n100	Chr.17:82879855 - 83048753 on Build GRCh38	Gain	LOC105371944 TBCD B3GNTL1
esv3893052	Chr.17:82895301 - 83102003 on Build GRCh38	Gain	LOC105371944 TBCD B3GNTL1 METRNL
nsv1057153	Chr.17:82876571 - 83091923 on Build GRCh38	Loss	LOC105371944 TBCD B3GNTL1 METRNL
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	DUS1L LRRC45 STRA13 ASPSCR1 MAFG-AS1 MAFG LOC105376791 MIR6787 LOC101929552 LOC105376790 SLC16A3 RFNG PYCR1 P4HB NOTUM FASN PCYT2 RAC3 CCDC57 METRNL WDR45B NARF MCRIP1 SECTM1 DCXR CSNK1D UTS2R NPB OGFOD3 CD7 LOC105371944 ZNF750 HEXDC RAB40B LOC101929511 MIR4525 TBCD FOXK2 SNORD134 FN3K SIRT7 FN3KRP ANAPC11 MYADML2 PPP1R27 ARHGDIA TEX19 B3GNTL1 C17orf62 GPS1 ALYREF

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s)

transferase activity, transferring glycosyl groups