Hs00564697_cn

• Gene Symbol: B3GNTL1
• Assay Reference Genome Location: Chr.17:82947004 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 146712
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
• Gene Aliases: 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1
• Location: Chr.17:82942149-83051845 on Build GRCh38
• Assay Gene Location: Within Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNTL1	NM_001009905.2			NP_001009905.1
	NM_001320742.1			NP_001307671.1
	NM_001320743.1			NP_001307672.1
	NR_135465.1	13	1354
	NR_135466.1
	XM_006722272.3			XP_006722335.1
	XM_011523532.2			XP_011521834.1
	XM_011523535.1			XP_011521837.1
	XM_017024205.1			XP_016879694.1
	XM_017024206.1			XP_016879695.1
	AK054757.1
	AK126018.1	1	2945
	AY304503.1			AAQ74775.1
	AY634364.1			AAT47555.1
	BC019623.1			AAH19623.1
	U79265.1	1	1365

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	TBCD WDR45B LOC105371944 FOXK2 LOC105376791 MIR4525 ZNF750 B3GNTL1 RAB40B FN3KRP FN3K LOC101929552 METRNL
dgv3296n100	Chr.17:82851564 - 83091923 on Build GRCh38	Gain	TBCD B3GNTL1 LOC105371944 METRNL
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	LOC105371944 CCDC137 NOTUM ACTG1 MIR4525 TEX19 MYADML2 MAFG OXLD1 MAFG-AS1 RFNG B3GNTL1 ARL16 NPLOC4 FN3KRP OGFOD3 GPS1 LINC00482 TBCD STRA13 ANAPC11 FOXK2 MCRIP1 LOC105376790 HEXDC ASPSCR1 SLC25A10 CEP131 TSPAN10 TEPSIN PYCR1 UTS2R PPP1R27 MIR4740 GCGR ALYREF ARHGDIA FAAP100 P4HB TMEM105 WDR45B LOC100130370 SLC16A3 MIR6786 SIRT7 LOC105376791 AATK-AS1 HGS CCDC57 SECTM1 SLC38A10 LRRC45 RAC3 BAHCC1 DUS1L FN3K LOC101929552 LOC105371925 FASN FSCN2 NARF C17orf89 LOC101929511 C17orf62 MRPL12 ZNF750 PCYT2 CD7 RAB40B NPB AATK MIR3186 CSNK1D MIR6787 SNORD134 PDE6G DCXR
nsv576217	Chr.17:82937869 - 82960820 on Build GRCh38	Loss	TBCD B3GNTL1 LOC105371944
dgv3297n100	Chr.17:82879855 - 83048753 on Build GRCh38	Gain	TBCD B3GNTL1 LOC105371944
nsv529032	Chr.17:82946968 - 82963153 on Build GRCh38	Loss	B3GNTL1
nsv1057153	Chr.17:82876571 - 83091923 on Build GRCh38	Loss	TBCD B3GNTL1 LOC105371944 METRNL
esv3893052	Chr.17:82895301 - 83102003 on Build GRCh38	Gain	TBCD B3GNTL1 LOC105371944 METRNL
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	LOC105371944 NOTUM MIR4525 TEX19 MYADML2 MAFG MAFG-AS1 RFNG B3GNTL1 FN3KRP OGFOD3 GPS1 TBCD STRA13 ANAPC11 FOXK2 MCRIP1 LOC105376790 HEXDC ASPSCR1 PYCR1 UTS2R PPP1R27 ALYREF ARHGDIA P4HB WDR45B SLC16A3 SIRT7 LOC105376791 CCDC57 SECTM1 LRRC45 RAC3 DUS1L FN3K LOC101929552 FASN NARF LOC101929511 C17orf62 ZNF750 PCYT2 CD7 RAB40B NPB CSNK1D MIR6787 SNORD134 DCXR METRNL

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s)

transferase activity, transferring glycosyl groups