Hs00570019_cn

• Gene Symbol: TSPAN3
• Assay Reference Genome Location: Chr.15:77052392 on build GRCh38
• Cytoband: 15q24.3

Target Gene Details

• Entrez Gene ID: 10099
• Gene Name: tetraspanin 3
• Gene Aliases: TM4-A, TM4SF8, TSPAN-3
• Location: Chr.15:77044017-77071228 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TSPAN3	NM_001168412.1			NP_001161884.1
	NM_005724.5			NP_005715.1
	NM_198902.2			NP_944492.1
	XM_017021857.1			XP_016877346.1
	AF054840.1			AAC69716.1
	AF133423.1			AAF08362.1
	AK001305.1			BAA91613.1
	AK001310.1			BAA91615.1
	AK001326.1			BAA91627.1
	AK027793.1
	AK075336.1
	AK075482.1
	AK293677.1
	AK298157.1
	BC000704.2			AAH00704.1
	BC004280.1			AAH04280.1
	BC009248.2			AAH09248.1
	BC011206.1			AAH11206.1
	M69023.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv517068	Chr.15:76962203 - 77088880 on Build GRCh38	Gain+Loss	PSTPIP1 TSPAN3
esv2760041	Chr.15:76878209 - 77081106 on Build GRCh38	Gain	SCAPER PSTPIP1 TSPAN3 RCN2
nsv833058	Chr.15:76943554 - 77101298 on Build GRCh38	Loss	PSTPIP1 PEAK1 TSPAN3 RCN2
esv2749898	Chr.15:75764003 - 77933523 on Build GRCh38	Deletion	FBXO22-AS1 SCAPER TYRO3P MIR3713 LINGO1 PSTPIP1 LINC00597 LINGO1-AS1 HMG20A ETFA RCN2 TMEM266 ISL2 UBE2Q2 LOC101929439 NRG4 LINGO1-AS2 LOC101929457 FBXO22 LOC645752 PEAK1 TSPAN3 LOC441728
nsv1040852	Chr.15:76867896 - 77845199 on Build GRCh38	Gain	SCAPER LINGO1-AS2 LINGO1 LOC101929457 PSTPIP1 LINC00597 PEAK1 LINGO1-AS1 TSPAN3 HMG20A RCN2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell surface receptor signaling pathway
biological_process

Function(s)

molecular_function