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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:405746 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00572571_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
BX369506.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss B4GALNT4 LRRC56 LOC101059906 IFITM1 ANO9 IFITM2 MIR210 PHRF1 LMNTD2 RNH1 RASSF7 PGGHG HRAS SIGIRR IFITM5 IRF7 IFITM3 PKP3 CDHR5 PTDSS2 LOC143666 MIR210HG
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss B4GALNT4 PKP3 ANO9 SIGIRR
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC5AC B4GALNT4 TSPAN4 ANO9 MIR210 CD151 LMNTD2 RNH1 RASSF7 DRD4 MUC6 POLR2L TOLLIP MIR6744 SNORA52 MUC2 LOC143666 TALDO1 SCT CEND1 PIDD1 MIR210HG PANO1 SLC25A22 LRRC56 LOC101059906 CHID1 TMEM80 AP2A2 PDDC1 PHRF1 LOC171391 DEAF1 MUC5B RPLP2 PNPLA2 HRAS SIGIRR LOC101927503 IRF7 PKP3 CDHR5 EPS8L2 PTDSS2 CRACR2B
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain B4GALNT4 PKP3 ANO9 SIGIRR
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion B4GALNT4 PKP3 ANO9 RNH1 PTDSS2 SIGIRR
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain B4GALNT4 IFITM1 ANO9 IFITM2 BET1L PSMD13 PGGHG SIGIRR NLRP6 SIRT3 RIC8A IFITM5 ODF3 IFITM3 PKP3 MIR6743
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion B4GALNT4 PKP3 ANO9 PTDSS2 SIGIRR
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion B4GALNT4 TSPAN4 ANO9 MIR210 CD151 LMNTD2 RNH1 RASSF7 DRD4 POLR2L SNORA52 LOC143666 TALDO1 SCT CEND1 PIDD1 MIR210HG PANO1 SLC25A22 LRRC56 LOC101059906 CHID1 TMEM80 AP2A2 PDDC1 PHRF1 LOC171391 DEAF1 RPLP2 PNPLA2 HRAS SIGIRR IRF7 PKP3 CDHR5 EPS8L2 PTDSS2 CRACR2B
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss PKP3 SIGIRR

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