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See other SEMA3F CNV Assays ›
Gene Symbol
SEMA3F
Assay Reference Genome
Location

Chr.3:50183470 on build GRCh38
Cytoband
3p21.31
Assay ID Hs00590048_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6405

Gene Name:

 semaphorin 3F

Gene Aliases:

 SEMA-IV, SEMA4, SEMAK

Location:

 Chr.3:50155045-50189075 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SEMA3F NM_001318798.1 11 1080 NP_001305727.1
NM_001318800.1 11 1364 NP_001305729.1
NM_004186.4 12 1341 NP_004177.3
XM_005265381.4 12 1471 XP_005265438.1
XM_005265382.4 11 1181 XP_005265439.1
XM_006713289.3 6 953 XP_006713352.1
XM_006713290.3 12 1274 XP_006713353.1
XM_011533998.2 12 1273 XP_011532300.1
XM_011534000.2 12 1274 XP_011532302.1
AB209259.1 11 1034 BAD92496.1
BC042914.1 12 1337 AAH42914.1
U32172.1 AAB06012.1
U33920.1 11 1217 AAC50568.1
U38276.1 11 1358 AAB18276.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv523560 Chr.3:50134964 - 50314769 on Build GRCh38 Loss MIR6872 IFRD2 LOC107986035 HYAL1 SEMA3B SEMA3B-AS1 SEMA3F-AS1 GNAI2 LSMEM2 SLC38A3 GNAT1 HYAL3 NAT6 MIR5787 SEMA3F MIR566
esv2759148 Chr.3:50161045 - 50333946 on Build GRCh38 Loss RASSF1 HYAL2 TUSC2 MIR6872 IFRD2 HYAL1 SEMA3B SEMA3B-AS1 GNAI2 LSMEM2 SLC38A3 GNAT1 HYAL3 NAT6 MIR5787 SEMA3F MIR566
dgv602n27 Chr.3:50140578 - 50287241 on Build GRCh38 Loss SEMA3B SEMA3B-AS1 SEMA3F-AS1 GNAI2 LSMEM2 MIR6872 SLC38A3 GNAT1 LOC107986035 MIR5787 SEMA3F MIR566
nsv515986 Chr.3:50066874 - 50254353 on Build GRCh38 Loss SEMA3F-AS1 GNAI2 RBM6 SLC38A3 GNAT1 RBM5-AS1 LOC107986035 MIR5787 SEMA3F RBM5 MIR566
dgv8316n54 Chr.3:50115923 - 50299991 on Build GRCh38 Loss MIR6872 IFRD2 LOC107986035 RBM5 HYAL1 SEMA3B SEMA3B-AS1 SEMA3F-AS1 GNAI2 LSMEM2 SLC38A3 GNAT1 HYAL3 NAT6 MIR5787 SEMA3F MIR566
nsv834692 Chr.3:50161052 - 50356033 on Build GRCh38 Loss RASSF1 HYAL2 TUSC2 MIR6872 IFRD2 NPRL2 TMEM115 HYAL1 SEMA3B SEMA3B-AS1 GNAI2 LSMEM2 CYB561D2 SLC38A3 GNAT1 ZMYND10 RASSF1-AS1 HYAL3 NAT6 MIR5787 SEMA3F MIR566
nsv834690 Chr.3:50064402 - 50263192 on Build GRCh38 Loss SEMA3F-AS1 GNAI2 RBM6 SLC38A3 GNAT1 RBM5-AS1 LOC107986035 MIR5787 SEMA3F RBM5 MIR566
nsv523662 Chr.3:50107518 - 50547568 on Build GRCh38 Loss IFRD2 NPRL2 RBM5 TMEM115 HYAL1 GNAI2 SLC38A3 CACNA2D2 ZMYND10 RASSF1-AS1 RASSF1 HYAL2 TUSC2 MIR6872 LOC107986035 SEMA3B SEMA3B-AS1 SEMA3F-AS1 LSMEM2 CYB561D2 GNAT1 HYAL3 NAT6 MIR5787 SEMA3F MIR566
nsv470561 Chr.3:50121341 - 50547568 on Build GRCh38 Loss IFRD2 NPRL2 TMEM115 HYAL1 GNAI2 SLC38A3 CACNA2D2 ZMYND10 RASSF1-AS1 RASSF1 HYAL2 TUSC2 MIR6872 LOC107986035 SEMA3B SEMA3B-AS1 SEMA3F-AS1 LSMEM2 CYB561D2 GNAT1 HYAL3 NAT6 MIR5787 SEMA3F MIR566
nsv954855 Chr.3:50152468 - 50439169 on Build GRCh38 Deletion IFRD2 NPRL2 TMEM115 HYAL1 GNAI2 SLC38A3 CACNA2D2 ZMYND10 RASSF1-AS1 RASSF1 HYAL2 TUSC2 MIR6872 LOC107986035 SEMA3B SEMA3B-AS1 SEMA3F-AS1 LSMEM2 CYB561D2 GNAT1 HYAL3 NAT6 MIR5787 SEMA3F MIR566

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