Hs00594145_cn

• Gene Symbol: CORO7
• Assay Reference Genome Location: Chr.16:4381565 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 79585
• Gene Name: coronin 7
• Gene Aliases: 0610011B16Rik, CRN7, POD1
• Location: Chr.16:4354542-4416961 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CORO7	NM_001201472.1			NP_001188401.1
	NM_001201473.1			NP_001188402.1
	NM_024535.4			NP_078811.3
	AK025674.1			BAB15211.1
	AK094596.1
	AK097238.1
	AK294045.1
	AK296723.1
	AK296807.1
	AK303353.1
	AK309327.1
	AK309763.1
	BC117289.1
	BC117291.1

Target Gene Details

• Entrez Gene ID: 100529144
• Gene Name: CORO7-PAM16 readthrough
• Gene Aliases: -
• Location: Chr.16:4340251-4416961 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CORO7-PAM16	NM_001201479.1			NP_001188408.1
	AL833954.1

Target Gene Details

• Entrez Gene ID: 114990
• Gene Name: vasorin
• Gene Aliases: SLITL2
• Location: Chr.16:4371848-4383528 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
VASN	NM_138440.2	2	843	NP_612449.2
	AY166584.1	1	688	AAO27704.1
	AY358298.1	3	599	AAQ88665.1
	AY358299.1	2	807	AAQ88666.1
	BC013767.1	1	472	AAH13767.1
	BC068575.1	2	843	AAH68575.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv471075	Chr.16:4317729 - 4395326 on Build GRCh38	Loss	CORO7 CORO7-PAM16 PAM16 GLIS2-AS1 VASN GLIS2
nsv1160332	Chr.16:4367643 - 4486554 on Build GRCh38	Duplication	NMRAL1 DNAJA3 CORO7 CORO7-PAM16 HMOX2 VASN
nsv833132	Chr.16:4370092 - 4463448 on Build GRCh38	Loss	NMRAL1 DNAJA3 CORO7 CORO7-PAM16 VASN
nsv1046986	Chr.16:4049000 - 5555721 on Build GRCh38	Gain	NMRAL1 MGRN1 DNAJA3 C16orf71 HMOX2 PAM16 TFAP4 UBALD1 ALG1 VASN ADCY9 GLIS2 ANKS3 LOC105371063 CORO7-PAM16 SMIM22 ZNF500 SEPT12 GLIS2-AS1 ROGDI PPL CDIP1 RBFOX1 LINC01569 MIR6769A NAGPA-AS1 CORO7 NUDT16L1 EEF2KMT GLYR1 SEC14L5 SRL C16orf96 NAGPA C16orf89 UBN1
nsv571274	Chr.16:4309420 - 4441189 on Build GRCh38	Gain	DNAJA3 CORO7 CORO7-PAM16 PAM16 GLIS2-AS1 VASN GLIS2
nsv527866	Chr.16:4206462 - 4412618 on Build GRCh38	Loss	LOC105371063 CORO7 CORO7-PAM16 PAM16 TFAP4 LINC01569 SRL GLIS2-AS1 VASN GLIS2
esv3584924	Chr.16:4330628 - 4469258 on Build GRCh38	Gain	NMRAL1 DNAJA3 CORO7 CORO7-PAM16 PAM16 VASN GLIS2
nsv520212	Chr.16:4354619 - 4390827 on Build GRCh38	Loss	CORO7 CORO7-PAM16 VASN
esv23732	Chr.16:4340813 - 4476244 on Build GRCh38	Gain	NMRAL1 DNAJA3 CORO7 CORO7-PAM16 HMOX2 PAM16 VASN

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor actin binding protein

Gene Ontology Categories:

Process(es)

Golgi to endosome transport
protein transport
actin filament polymerization
negative regulation of epithelial to mesenchymal transition
negative regulation of transforming growth factor beta receptor signaling pathway
cellular response to hypoxia
cellular response to redox state
cell-cell adhesion

Function(s)

actin binding
protein binding
transforming growth factor beta binding
cadherin binding involved in cell-cell adhesion