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Gene Symbol
GPSM3
Assay Reference Genome
Location

Chr.6:32191321 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00613268_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63940

Gene Name:

 G-protein signaling modulator 3

Gene Aliases:

 AGS4, C6orf9, G18, G18.1a, G18.1b, G18.2, NG1

Location:

 Chr.6:32190766-32195523 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GPSM3 NM_001276501.1 4 930 NP_001263430.1
NM_022107.2 8 901 NP_071390.1
AF155657.1 4 549 AAF67476.1
AJ243937.1 8 901 CAB51287.1
AK313922.1
BC018724.1 4 593 AAH18724.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss RNF5 ATF6B NOTCH4 LOC100507547 PPT2 AGER TNXB MIR6833 PPT2-EGFL8 PBX2 MIR6721 PRRT1 EGFL8 GPSM3 AGPAT1 FKBPL
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss ATF6B HLA-DQB1-AS1 C4A NOTCH4 STK19 LOC100507547 PPT2 HSPA1B HLA-DQA1 TNXA NELFE HCG23 RNF5 CYP21A1P MIR1236 C4B SNORD52 SLC44A4 PRRT1 HLA-DQB1 AGPAT1 SKIV2L CFB EHMT2 C6orf10 ZBTB12 TNXB MIR6833 NEU1 PBX2 HLA-DRB5 LOC101929163 HLA-DRB1 GPSM3 FKBPL C2-AS1 DXO SNORD48 HLA-DRA AGER C6orf48 PPT2-EGFL8 C2 HSPA1A BTNL2 MIR6721 CYP21A2 EGFL8 HLA-DRB6
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss HLA-DQA2 C6orf10 ATF6B HLA-DQB1-AS1 C4A NOTCH4 LOC100507547 PPT2 HLA-DQA1 TNXA TNXB MIR6833 PBX2 MIR3135B HLA-DRB5 LOC101929163 HLA-DQB2 HLA-DRB1 GPSM3 FKBPL HCG23 RNF5 CYP21A1P HLA-DRA AGER PPT2-EGFL8 C4B BTNL2 MIR6721 CYP21A2 PRRT1 EGFL8 HLA-DQB1 AGPAT1 HLA-DRB6
nsv602109 Chr.6:32190542 - 32193653 on Build GRCh38 Loss GPSM3
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss SKIV2L CFB ATF6B C4A NOTCH4 STK19 LOC100507547 PPT2 TNXA TNXB MIR6833 PBX2 NELFE GPSM3 FKBPL C2-AS1 DXO RNF5 CYP21A1P AGER MIR1236 PPT2-EGFL8 C4B C2 MIR6721 CYP21A2 PRRT1 EGFL8 AGPAT1
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion AIF1 VARS CLIC1 LY6G5B LSM2 SAPCD1-AS1 ATF6B LY6G6C C4A NOTCH4 STK19 LOC100507547 PPT2 MIR4646 HSPA1B LY6G6D TNXA NELFE LTB DDX39B GPANK1 HCG23 PRRC2A LY6G6F RNF5 CYP21A1P C6orf47 SNORD84 LOC100287329 MIR1236 C4B HCP5 SNORD52 SLC44A4 PRRT1 LTA AGPAT1 SKIV2L CFB EHMT2 MICB ABHD16A C6orf10 HSPA1L HCG26 ZBTB12 NFKBIL1 CSNK2B SNORD117 TNXB MIR6833 NEU1 BAG6 SNORA38 ATP6V1G2 PBX2 HLA-DRB5 MSH5 LOC101929163 TNF HLA-DRB1 GPSM3 LY6G6E FKBPL C2-AS1 NCR3 DXO SAPCD1 VWA7 DDX39B-AS1 ATP6V1G2-DDX39B SNORD48 HLA-DRA DDAH2 AGER LY6G5C MSH5-SAPCD1 C6orf48 C6orf25 PPT2-EGFL8 MIR6832 C2 HSPA1A MCCD1 LOC102725068 APOM BTNL2 MIR6721 CYP21A2 EGFL8 LST1 HLA-DRB6
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion RPS18 AIF1 VARS LY6G5B HSD17B8 LOC100294145 ATF6B HLA-DQB1-AS1 BRD2 LOC100507547 ZBTB22 LTB B3GALT4 HLA-DPB1 GPANK1 HCG23 RNF5 CYP21A1P C6orf47 SNORD84 MIR6834 PHF1 HCP5 MIR5004 RING1 PRRT1 HLA-DQB1 CFB MICB DAXX HSPA1L HCG26 HLA-DOA ZBTB12 NFKBIL1 CSNK2B SNORD117 PSMB8 PSMB8-AS1 TNXB TAP1 LOC101929163 RGL2 TNF HLA-DRB1 CUTA GPSM3 FKBPL PPP1R2P1 C2-AS1 SAPCD1 WDR46 COL11A2 PSMB9 SNORD48 HLA-DPA1 DDAH2 AGER MIR6873 C6orf48 C6orf25 PPT2-EGFL8 HSPA1A APOM MIR6721 EGFL8 ZBTB9 HLA-DPB2 HLA-DQA2 CLIC1 LSM2 SAPCD1-AS1 LY6G6C C4A NOTCH4 STK19 HCG25 PPT2 MIR4646 HSPA1B LY6G6D HLA-DQA1 TNXA PFDN6 NELFE SYNGAP1 DDX39B HLA-DMB PRRC2A LY6G6F MIR219A1 LOC100287329 TAPBP MIR1236 C4B SNORD52 SLC44A4 LTA AGPAT1 SKIV2L KIFC1 EHMT2 ABHD16A C6orf10 HCG24 TAP2 RXRB MIR6833 HLA-DOB NEU1 BAG6 SNORA38 ATP6V1G2 PBX2 MIR3135B HLA-DRB5 MSH5 SLC39A7 HLA-DQB2 HLA-DMA LY6G6E NCR3 DXO VWA7 DDX39B-AS1 ATP6V1G2-DDX39B HLA-DRA LY6G5C MSH5-SAPCD1 MIR6832 C2 MCCD1 LOC102725068 BTNL2 CYP21A2 LST1 HLA-DRB6 VPS52
nsv462877 Chr.6:32183666 - 32210123 on Build GRCh38 Loss AGER PBX2 NOTCH4 GPSM3
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss RNF5 ATF6B NOTCH4 LOC100507547 PPT2 AGER TNXB MIR6833 PPT2-EGFL8 PBX2 MIR6721 PRRT1 EGFL8 GPSM3 AGPAT1 FKBPL
dgv10486n54 Chr.6:32187671 - 32193653 on Build GRCh38 Loss PBX2 GPSM3
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion RPS18 AIF1 VARS LY6G5B HSD17B8 LOC100294145 ATF6B HLA-DQB1-AS1 BRD2 LOC100507547 ZBTB22 LTB B3GALT4 HLA-DPB1 GPANK1 HCG23 RNF5 CYP21A1P C6orf47 SNORD84 MIR6834 PHF1 HCP5 MIR5004 RING1 PRRT1 HLA-DQB1 CFB MICB DAXX HSPA1L HCG26 HLA-DOA ZBTB12 NFKBIL1 CSNK2B SNORD117 PSMB8 PSMB8-AS1 TNXB TAP1 LOC101929163 RGL2 TNF HLA-DRB1 CUTA GPSM3 FKBPL PPP1R2P1 C2-AS1 SAPCD1 WDR46 COL11A2 PSMB9 SNORD48 HLA-DPA1 DDAH2 AGER MIR6873 C6orf48 C6orf25 PPT2-EGFL8 HSPA1A APOM MIR6721 EGFL8 ZBTB9 HLA-DPB2 HLA-DQA2 CLIC1 LSM2 SAPCD1-AS1 LY6G6C C4A NOTCH4 STK19 HCG25 PPT2 MIR4646 HSPA1B LY6G6D HLA-DQA1 TNXA PFDN6 NELFE SYNGAP1 DDX39B HLA-DMB PRRC2A LY6G6F MIR219A1 LOC100287329 TAPBP MIR1236 C4B SNORD52 SLC44A4 LTA AGPAT1 SKIV2L KIFC1 EHMT2 ABHD16A C6orf10 HCG24 TAP2 RXRB MIR6833 HLA-DOB NEU1 BAG6 SNORA38 ATP6V1G2 PBX2 MIR3135B HLA-DRB5 MSH5 SLC39A7 HLA-DQB2 HLA-DMA LY6G6E NCR3 DXO VWA7 DDX39B-AS1 ATP6V1G2-DDX39B HLA-DRA LY6G5C MSH5-SAPCD1 MIR6832 C2 MCCD1 LOC102725068 BTNL2 CYP21A2 LST1 HLA-DRB6 VPS52
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss AIF1 VARS CLIC1 LY6G5B LSM2 SAPCD1-AS1 ATF6B LY6G6C C4A NOTCH4 STK19 LOC100507547 PPT2 MIR4646 HSPA1B LY6G6D MIR6891 TNXA NELFE LTB DDX39B GPANK1 HCG23 PRRC2A LY6G6F RNF5 CYP21A1P C6orf47 SNORD84 LOC100287329 MIR1236 C4B HCP5 SNORD52 SLC44A4 PRRT1 LTA AGPAT1 SKIV2L CFB EHMT2 MICB ABHD16A C6orf10 HSPA1L HCG26 ZBTB12 NFKBIL1 CSNK2B SNORD117 TNXB MIR6833 NEU1 BAG6 SNORA38 ATP6V1G2 PBX2 MSH5 LOC101929163 TNF GPSM3 LY6G6E FKBPL C2-AS1 NCR3 DXO SAPCD1 VWA7 DDX39B-AS1 ATP6V1G2-DDX39B SNORD48 HLA-B HLA-DRA DDAH2 MICA AGER LY6G5C MSH5-SAPCD1 C6orf48 C6orf25 PPT2-EGFL8 MIR6832 C2 HSPA1A MCCD1 LOC102725068 APOM BTNL2 MIR6721 CYP21A2 EGFL8 LST1

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