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See other GTF2H4 CNV Assays ›
Gene Symbol
GTF2H4
Assay Reference Genome
Location

Chr.6:30913908 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00620020_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2968

Gene Name:

 general transcription factor IIH subunit 4

Gene Aliases:

 P52, TFB2, TFIIH

Location:

 Chr.6:30908200-30914103 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GTF2H4 NM_001517.4 14 1521 NP_001508.1
AK222607.1 14 1425 BAD96327.1
BC004935.1 14 1493 AAH04935.1
BC016302.2 14 1493 AAH16302.1
BT007321.1 13 1314 AAP35985.1
Y07595.1 14 1441 CAA68870.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion DHX16 HLA-L PPP1R18 MAS1L ZNRD1ASP PSORS1C1 MIR6891 HLA-C HCG27 HCG4 OR12D3 RNF39 HCG22 OR10C1 FLOT1 HCG8 DDR1 MDC1 HLA-A OR14J1 HLA-F POU5F1 ATAT1 OR12D2 TRIM40 HCG17 ABCF1 TCF19 TRIM10 C6orf136 RPP21 IER3 HLA-F-AS1 HLA-J MDC1-AS1 MOG MRPS18B OR5V1 HLA-G MIR4640 LOC105375014 ZNRD1 LINC00243 TUBB LOC554223 HLA-H NRM PSORS1C2 GABBR1 CDSN TRIM31 TRIM26 ZFP57 HCG4B MICA IFITM4P OR11A1 SFTA2 C6orf15 OR2J2 VARS2 TRIM39 TRIM39-RPP21 MIR877 HCG20 GNL1 PSORS1C3 OR2H2 PRR3 TRIM31-AS1 TRIM15 PPP1R10 PPP1R11 DPCR1 SNORD32B HLA-B MUC21 HCG18 LOC101929006 HCG9 CCHCR1 GTF2H4 HLA-E HLA-K MUC22 UBD OR2H1 LINC01015
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss TUBB DHX16 NRM PSORS1C2 PPP1R18 CDSN PSORS1C1 HLA-C HCG27 SFTA2 HCG22 FLOT1 C6orf15 DDR1 MDC1 VARS2 POU5F1 ATAT1 MIR877 HCG20 ABCF1 TCF19 GNL1 PSORS1C3 C6orf136 PRR3 PPP1R10 DPCR1 IER3 MDC1-AS1 MUC21 MRPS18B CCHCR1 GTF2H4 HLA-E MUC22 MIR4640 LOC105375014 LINC00243
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion DHX16 HLA-L PPP1R18 MAS1L TRIM27 ZNRD1ASP PSORS1C1 HCG27 OR2J3 HCG4 OR12D3 RNF39 HCG22 OR10C1 FLOT1 HCG8 DDR1 MDC1 HLA-A OR14J1 HLA-F POU5F1 ZNF311 ATAT1 OR12D2 LOC100129636 TRIM40 OR2W1 HCG17 ABCF1 TCF19 TRIM10 C6orf136 RPP21 IER3 HLA-F-AS1 LINC00533 HLA-J MDC1-AS1 MOG MRPS18B HCG14 OR5V1 HLA-G MIR4640 LOC105375014 ZNRD1 LINC00243 TUBB LOC554223 HLA-H NRM PSORS1C2 GABBR1 CDSN TRIM31 TRIM26 ZFP57 HCG4B IFITM4P OR11A1 SFTA2 C6orf15 OR2J2 VARS2 HCG16 TRIM39 LINC01556 TRIM39-RPP21 MIR877 HCG20 GNL1 PSORS1C3 OR2H2 PRR3 TRIM31-AS1 TRIM15 PPP1R10 PPP1R11 DPCR1 SNORD32B MUC21 LINC01623 HCG18 LOC101929006 HCG9 CCHCR1 OR2B3 GTF2H4 HLA-E HLA-K MUC22 UBD OR2H1 LINC01015
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion DHX16 HLA-L PPP1R18 ZNRD1ASP PSORS1C1 HLA-C HCG27 HCG4 RNF39 HCG22 FLOT1 HCG8 DDR1 MDC1 HLA-A HLA-F POU5F1 ATAT1 TRIM40 HCG17 ABCF1 TCF19 TRIM10 C6orf136 RPP21 IER3 HLA-F-AS1 HLA-J MDC1-AS1 MRPS18B HLA-G MIR4640 LOC105375014 ZNRD1 LINC00243 TUBB LOC554223 HLA-H NRM PSORS1C2 CDSN TRIM31 TRIM26 HCG4B IFITM4P SFTA2 C6orf15 VARS2 TRIM39 TRIM39-RPP21 MIR877 HCG20 GNL1 PSORS1C3 PRR3 TRIM31-AS1 TRIM15 PPP1R10 PPP1R11 DPCR1 MUC21 HCG18 HCG9 CCHCR1 GTF2H4 HLA-E HLA-K MUC22
esv3608518 Chr.6:30889700 - 30987504 on Build GRCh38 Gain MUC21 DDR1 GTF2H4 VARS2 MIR4640 SFTA2 DPCR1
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss DHX16 HLA-L PPP1R18 ZNRD1ASP PSORS1C1 HLA-C HCG27 RNF39 HCG22 FLOT1 HCG8 DDR1 MDC1 HLA-A POU5F1 ATAT1 TRIM40 HCG17 ABCF1 TCF19 TRIM10 C6orf136 RPP21 IER3 HLA-J MDC1-AS1 MRPS18B MIR4640 LOC105375014 ZNRD1 LINC00243 TUBB HLA-H NRM PSORS1C2 CDSN TRIM31 TRIM26 HCG4B SFTA2 C6orf15 VARS2 TRIM39 TRIM39-RPP21 MIR877 HCG20 GNL1 PSORS1C3 PRR3 TRIM31-AS1 TRIM15 PPP1R10 PPP1R11 DPCR1 MUC21 HCG18 HCG9 CCHCR1 GTF2H4 HLA-E HLA-K MUC22
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion TUBB DHX16 NRM PSORS1C2 PPP1R18 CDSN PSORS1C1 HLA-C HCG27 SFTA2 HCG22 FLOT1 C6orf15 DDR1 MDC1 VARS2 POU5F1 ATAT1 MIR877 HCG20 ABCF1 TCF19 GNL1 PSORS1C3 C6orf136 PRR3 PPP1R10 DPCR1 IER3 MDC1-AS1 MUC21 MRPS18B CCHCR1 GTF2H4 HLA-E MUC22 MIR4640 LOC105375014 LINC00243
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion TUBB DHX16 NRM PPP1R18 SFTA2 HCG22 FLOT1 DDR1 MDC1 VARS2 ATAT1 MIR877 HCG20 ABCF1 GNL1 C6orf136 PRR3 PPP1R10 DPCR1 IER3 MDC1-AS1 MUC21 MRPS18B GTF2H4 MUC22 MIR4640 LOC105375014 LINC00243
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication DHX16 HLA-L PPP1R18 ZNRD1ASP PSORS1C1 MIR6891 HLA-C HCG27 RNF39 HCG22 FLOT1 HCG8 DDR1 MDC1 POU5F1 ATAT1 TRIM40 HCG17 ABCF1 TCF19 TRIM10 C6orf136 RPP21 IER3 HLA-J MDC1-AS1 MRPS18B HCG26 MIR4640 LOC105375014 ZNRD1 LINC00243 TUBB NRM PSORS1C2 CDSN TRIM31 HCP5 TRIM26 MICA SFTA2 C6orf15 VARS2 TRIM39 TRIM39-RPP21 MIR877 HCG20 GNL1 PSORS1C3 PRR3 TRIM31-AS1 TRIM15 PPP1R10 PPP1R11 DPCR1 LOC102725068 HLA-B MUC21 HCG18 CCHCR1 GTF2H4 HLA-E MUC22
nsv525438 Chr.6:30897052 - 30966198 on Build GRCh38 Gain DDR1 GTF2H4 VARS2 SFTA2 DPCR1
nsv1031677 Chr.6:30889765 - 31005088 on Build GRCh38 Gain MUC21 DDR1 GTF2H4 VARS2 MIR4640 SFTA2 DPCR1

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