Genomic Map
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Target Gene Details
Entrez Gene ID: | 5170 |
Gene Name: | 3-phosphoinositide dependent protein kinase 1 |
Gene Aliases: |
PDK1, PDPK2, PDPK2P, PRO0461 |
Location: |
Chr.16:2537964-2603190 on Build GRCh38 |
Assay Gene Location: | Within Exon 16 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PDPK1 | NM_001261816.1 | 12 | 1590 | NP_001248745.1 |
| NM_002613.4 | 14 | 1801 | NP_002604.1 | |
| NM_031268.5 | 11 | 1420 | NP_112558.2 | |
| XM_011522521.2 | 14 | 5489 | XP_011520823.1 | |
| XM_011522523.2 | 11 | 5113 | XP_011520825.1 | |
| XM_017023271.1 | 13 | 5869 | XP_016878760.1 | |
| XM_017023272.1 | 13 | 2425 | XP_016878761.1 | |
| XM_017023273.1 | 13 | 2134 | XP_016878762.1 | |
| XM_017023274.1 | 14 | 2272 | XP_016878763.1 | |
| XM_017023275.1 | 10 | 5494 | XP_016878764.1 | |
| XM_017023276.1 | 10 | 1738 | XP_016878765.1 | |
| XM_017023277.1 | 11 | 1836 | XP_016878766.1 | |
| AB209835.1 | 12 | 1557 | BAD93072.1 | |
| AF017995.1 | 14 | 1732 | AAC51825.1 | |
| AK131060.1 | 14 | 1735 | ||
| AK222581.1 | 14 | 1744 | BAD96301.1 | |
| BC006339.2 | 11 | 1381 | AAH06339.2 | |
| BC012103.1 | 14 | 1761 | AAH12103.1 | |
| BC033494.1 | 11 | 1333 | AAH33494.1 | |
| CR536517.1 | CAG38755.1 | |||
| Y15056.1 | 14 | 1731 | CAA75341.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication |
 LOC105371184
SSTR5-AS1
LOC106660606
PRSS27
PDIA2
SNORA78
CAPN15
SNORA64
SYNGR3
UNKL
MSRB1
MIR5587
RPL3L
MRPL28
MIR3677
NTN3
JMJD8
HS3ST6
MIR3176
TPSB2
NME4
PRR25
FAM234A
TSC2
RAB11FIP3
AXIN1
LMF1
LOC100134368
PDPK1
CASKIN1
HBQ1
GNG13
RHBDF1
SNRNP25
TELO2
C16orf59
HN1L
MIR6767
HBM
TMEM8A
LOC105371045
PRSS29P
GNPTG
MEIOB
ERVK13-1
CRAMP1
LINC00254
RNF151
SNHG9
CACNA1H
CEMP1
NME3
MIR4516
FAHD1
BAIAP3
CCDC78
LOC101929280
CCNF
NUBP2
TMEM204
TPSAB1
SNORA10
MAPK8IP3
HBZ
E4F1
SNORD60
ECI1
MIR6511B1
ABCA17P
RPUSD1
NTHL1
DECR2
PGP
WDR24
LOC105371038
CLCN7
NDUFB10
MCRIP2
RAB40C
FLJ42627
BRICD5
MLST8
MIR3177
WFIKKN1
MPG
HBA2
TPSD1
LOC652276
FAM173A
MIR4717
ATP6V0C
WDR90
LOC107984876
AMDHD2
RNPS1
ARHGDIG
RAB26
POLR3K
NARFL
ABCA3
PKD1
KCTD5
LOC105371046
TRAF7
LOC105371047
HAGHL
MIR662
DNASE1L2
MIR1225
LINC00235
METRN
WASIR2
MIR3180-5
DDX11L10
CHTF18
RPL23AP5
GFER
RHBDL1
MIR3178
RGS11
SLC9A3R2
TPSG1
MIR6859-4
MRPS34
SOX8
LUC7L
EME2
SSTR5
PTX4
NOXO1
PRR35
IFT140
LOC100287175
MSLN
RPS2
SNHG19
SPSB3
PIGQ
TSR3
LOC729652
HAGH
C1QTNF8
TBC1D24
NHLRC4
RHOT2
MIR6768
LOC107987233
UBE2I
HBA1
FBXL16
LMF1-AS1
STUB1
MIR940
ZNF598
NPRL3
IGFALS
TBL3
NPW
C16orf91
LOC105371049
CCDC154
METTL26
|
| esv2760067 | Chr.16:2486824 - 2820535 on Build GRCh38 | Gain+Loss |
TCEB2
PRSS27
PRSS21
KCTD5
FLJ42627
TBC1D24
SRRM2
PRSS41
ERVK13-1
PRSS33
LOC652276
CEMP1
ATP6V0C
PDPK1
MIR3178
AMDHD2
SRRM2-AS1
|
| dgv2693n100 | Chr.16:2593295 - 2676863 on Build GRCh38 | Gain |
FLJ42627
PDPK1
ERVK13-1
LOC652276
|
| esv3637634 | Chr.16:2586284 - 2610862 on Build GRCh38 | Gain |
PDPK1
LOC652276
|
| nsv833122 | Chr.16:2501717 - 2663937 on Build GRCh38 | Loss |
CEMP1
ATP6V0C
FLJ42627
PDPK1
TBC1D24
MIR3178
ERVK13-1
AMDHD2
LOC652276
|
| nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain |
LOC106660606
BRICD5
MLST8
LOC652276
MIR4717
CEMP1
ATP6V0C
MIR4516
CCNF
SNHG19
AMDHD2
RNPS1
RAB26
MIR3677
NTN3
ABCA3
PKD1
LOC729652
TBC1D24
TRAF7
MIR6768
E4F1
TSC2
SNORD60
ECI1
DNASE1L2
MIR1225
MIR940
MIR6511B1
ABCA17P
MIR3180-5
PDPK1
PGP
CASKIN1
MIR3178
LOC105371049
C16orf59
MIR6767
|
| nsv833123 | Chr.16:2561247 - 2764988 on Build GRCh38 | Gain+Loss |
PRSS27
KCTD5
FLJ42627
PDPK1
SRRM2
ERVK13-1
LOC652276
SRRM2-AS1
|
| dgv780e212 | Chr.16:2595646 - 2700191 on Build GRCh38 | Gain |
KCTD5
FLJ42627
PDPK1
ERVK13-1
LOC652276
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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