Genomic Map
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Target Gene Details
Entrez Gene ID: | 5170 |
Gene Name: | 3-phosphoinositide dependent protein kinase 1 |
Gene Aliases: |
PDK1, PDPK2, PDPK2P, PRO0461 |
Location: |
Chr.16:2537964-2603190 on Build GRCh38 |
Assay Gene Location: | Within Exon 16 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PDPK1 | NM_001261816.1 | 12 | 1590 | NP_001248745.1 |
| NM_002613.4 | 14 | 1801 | NP_002604.1 | |
| NM_031268.5 | 11 | 1420 | NP_112558.2 | |
| XM_011522521.2 | 14 | 5489 | XP_011520823.1 | |
| XM_011522523.2 | 11 | 5113 | XP_011520825.1 | |
| XM_017023271.1 | 13 | 5869 | XP_016878760.1 | |
| XM_017023272.1 | 13 | 2425 | XP_016878761.1 | |
| XM_017023273.1 | 13 | 2134 | XP_016878762.1 | |
| XM_017023274.1 | 14 | 2272 | XP_016878763.1 | |
| XM_017023275.1 | 10 | 5494 | XP_016878764.1 | |
| XM_017023276.1 | 10 | 1738 | XP_016878765.1 | |
| XM_017023277.1 | 11 | 1836 | XP_016878766.1 | |
| AB209835.1 | 12 | 1557 | BAD93072.1 | |
| AF017995.1 | 14 | 1732 | AAC51825.1 | |
| AK131060.1 | 14 | 1735 | ||
| AK222581.1 | 14 | 1744 | BAD96301.1 | |
| BC006339.2 | 11 | 1381 | AAH06339.2 | |
| BC012103.1 | 14 | 1761 | AAH12103.1 | |
| BC033494.1 | 11 | 1333 | AAH33494.1 | |
| CR536517.1 | CAG38755.1 | |||
| Y15056.1 | 14 | 1731 | CAA75341.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication |
 TMEM204
LOC105371045
LOC100134368
SSTR5
SNORA10
DDX11L10
RAB11FIP3
LOC105371038
ABCA17P
AXIN1
WASIR2
AMDHD2
LOC105371184
MIR6768
FAM234A
HBQ1
MIR3176
LOC106660606
SNORA78
SNORA64
ABCA3
JMJD8
CAPN15
MIR6767
LOC105371047
PRSS29P
MRPS34
NTN3
NDUFB10
LINC00254
TBL3
HBA1
RAB26
MIR6511B1
PRR35
GFER
HBM
MIR3180-5
RGS11
BAIAP3
TSR3
RHBDL1
NOXO1
ATP6V0C
SNRNP25
MEIOB
LUC7L
RPL3L
SNHG19
TPSD1
LINC00235
PDPK1
SNHG9
METTL26
TPSG1
POLR3K
HN1L
NHLRC4
TPSAB1
CCNF
METRN
FAM173A
HBA2
PTX4
WDR90
RNPS1
CCDC154
MIR5587
NME3
MIR662
RHOT2
MIR1225
MIR940
FLJ42627
MIR3177
HAGHL
GNPTG
SPSB3
UNKL
ZNF598
CRAMP1
RAB40C
CEMP1
MPG
HAGH
SNORD60
MIR6859-4
TRAF7
SLC9A3R2
PRSS27
LOC652276
NTHL1
UBE2I
CCDC78
CACNA1H
CASKIN1
SYNGR3
SOX8
NME4
BRICD5
MIR3178
LOC729652
LMF1-AS1
FBXL16
IGFALS
MSLN
LOC105371049
LOC107987233
LOC105371046
NPW
MIR4717
TMEM8A
ECI1
NARFL
KCTD5
IFT140
MSRB1
LOC100287175
MCRIP2
FAHD1
STUB1
HBZ
ARHGDIG
E4F1
MIR4516
LMF1
C1QTNF8
NUBP2
SSTR5-AS1
MLST8
CHTF18
C16orf59
MAPK8IP3
MRPL28
RPUSD1
PRR25
RPS2
PKD1
MIR3677
TELO2
NPRL3
PIGQ
HS3ST6
WFIKKN1
LOC101929280
EME2
DECR2
DNASE1L2
RPL23AP5
CLCN7
RNF151
TBC1D24
C16orf91
ERVK13-1
RHBDF1
PGP
GNG13
WDR24
TPSB2
LOC107984876
PDIA2
TSC2
|
| esv2760067 | Chr.16:2486824 - 2820535 on Build GRCh38 | Gain+Loss |
PRSS21
SRRM2-AS1
PRSS27
LOC652276
FLJ42627
KCTD5
SRRM2
PDPK1
TBC1D24
ERVK13-1
TCEB2
MIR3178
PRSS41
PRSS33
AMDHD2
CEMP1
ATP6V0C
|
| dgv2693n100 | Chr.16:2593295 - 2676863 on Build GRCh38 | Gain |
LOC652276
FLJ42627
PDPK1
ERVK13-1
|
| esv3637634 | Chr.16:2586284 - 2610862 on Build GRCh38 | Gain |
LOC652276
PDPK1
|
| nsv833122 | Chr.16:2501717 - 2663937 on Build GRCh38 | Loss |
MIR3178
LOC652276
FLJ42627
AMDHD2
CEMP1
PDPK1
TBC1D24
ATP6V0C
ERVK13-1
|
| nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain |
MLST8
SNORD60
TRAF7
C16orf59
LOC652276
CASKIN1
SNHG19
PDPK1
ABCA17P
PKD1
BRICD5
CCNF
MIR3677
MIR3178
LOC729652
AMDHD2
MIR6768
RNPS1
LOC106660606
LOC105371049
ABCA3
MIR4717
MIR6767
MIR1225
ECI1
MIR940
NTN3
DNASE1L2
TBC1D24
RAB26
MIR6511B1
PGP
MIR3180-5
E4F1
MIR4516
CEMP1
ATP6V0C
TSC2
|
| nsv833123 | Chr.16:2561247 - 2764988 on Build GRCh38 | Gain+Loss |
SRRM2-AS1
PRSS27
LOC652276
FLJ42627
KCTD5
SRRM2
PDPK1
ERVK13-1
|
| dgv780e212 | Chr.16:2595646 - 2700191 on Build GRCh38 | Gain |
LOC652276
FLJ42627
KCTD5
PDPK1
ERVK13-1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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