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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3467454 on build GRCh38
Cytoband
17p13.2
Assay ID Hs00638433_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 NP_001164166.1
NM_001170696.1 NP_001164167.1
NM_001170697.1 NP_001164168.1
NM_001170698.1 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 NP_001308265.1
NM_001321337.1 NP_001308266.1
NM_032598.4 NP_115987.2
AF367472.1 AAK53408.1
AK295299.1
AK301892.1
AY032684.1 AAK51120.1
AY035867.1 AAK61373.1
AY035868.1 AAK61374.1
BC029483.1 AAH29483.1
BG716998.1
BI463957.1
BP371122.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR1D4 OR3A3 SPATA22 OR3A2 OR1E2 ASPA OR3A1 OR1A1 OR1A2 OR3A4P TRPV1 TRPV3 OR1E1
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain OR1D4 GSG2 PAFAH1B1 OR3A3 ATP2A3 OR3A2 CTNS OR1E2 TAX1BP3 RAP1GAP2 P2RX5 LOC105371592 P2RX5-TAX1BP3 OR1G1 OR1A2 CCDC92B OR3A4P LOC101927911 TRPV1 CLUH OR1E1 CAMKK1 EMC6 SPATA22 ITGAE SHPK NCBP3 MIR6776 LOC105371591 ASPA P2RX1 OR3A1 MIR1253 OR1D2 OR1A1 OR1D5 TRPV3
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain OR3A1 OR3A3 SPATA22 OR3A2 OR3A4P OR1E2 ASPA OR1E1
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion OR1D4 PAFAH1B1 OR3A3 SPATA22 OR3A2 OR1E2 MIR6776 RAP1GAP2 LOC105371591 ASPA OR3A1 LOC105371592 MIR1253 OR1D2 OR1G1 OR1A1 OR1D5 OR1A2 CCDC92B OR3A4P LOC101927911 CLUH TRPV3 OR1E1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain GSG2 EMC6 OR3A3 SPATA22 ITGAE OR3A2 SHPK NCBP3 CTNS OR1E2 TAX1BP3 ASPA P2RX5 P2RX5-TAX1BP3 TRPV1 TRPV3 OR1E1 CAMKK1
nsv528368 Chr.17:3459775 - 3507608 on Build GRCh38 Gain SPATA22 ASPA
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss OR3A3 SPATA22 OR3A2 OR1E2 TRPV3 ASPA OR1E1
nsv521277 Chr.17:3390044 - 3468885 on Build GRCh38 Gain OR3A3 SPATA22 OR1E2 OR1E1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss OR3A3 SPATA22 SHPK TRPV1 OR1E2 TRPV3 ASPA

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