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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:621207 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00654194_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK300991.1
AK308040.1
AK309157.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain LOC143666 MIR210HG DRD4 IRF7 DEAF1 MIR210 SCT LMNTD2 PHRF1 RASSF7 CDHR5
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 SCT CDHR5
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LOC143666 MIR210HG HRAS LOC101059906 IRF7 MIR210 SCT LMNTD2 PHRF1 RASSF7 LRRC56 CDHR5
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TSPAN4 EPS8L2 SNORA52 PIDD1 HRAS DRD4 IRF7 DEAF1 LOC101927503 LMNTD2 PHRF1 MUC5B RASSF7 CD151 MIR210HG MUC2 CRACR2B AP2A2 MIR210 LOC171391 TOLLIP PANO1 CEND1 SIGIRR LOC101059906 MUC6 TMEM80 B4GALNT4 ANO9 PKP3 SCT PDDC1 LRRC56 LOC143666 RPLP2 RNH1 MUC5AC SLC25A22 PTDSS2 TALDO1 PNPLA2 CHID1 MIR6744 POLR2L CDHR5
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss DRD4 IRF7 DEAF1 SCT PHRF1 CDHR5
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TSPAN4 EPS8L2 SNORA52 PIDD1 HRAS DRD4 IRF7 DEAF1 LOC101927503 LMNTD2 PHRF1 MUC5B RASSF7 CD151 MIR210HG MUC2 CRACR2B AP2A2 MIR210 LOC171391 TOLLIP PANO1 CEND1 SIGIRR TOLLIP-AS1 LOC101059906 MUC6 TMEM80 ANO9 SCT PDDC1 LRRC56 LOC143666 RPLP2 RNH1 MUC5AC SLC25A22 PTDSS2 TALDO1 PNPLA2 CHID1 MIR6744 POLR2L CDHR5
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss DRD4 IRF7 DEAF1 SCT PHRF1 CDHR5
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain HRAS DRD4 IRF7 DEAF1 SCT LMNTD2 PHRF1 RASSF7 LRRC56 LOC143666 MIR210HG MIR210 CDHR5
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TSPAN4 EPS8L2 SNORA52 PIDD1 HRAS DRD4 IRF7 DEAF1 LMNTD2 PHRF1 RASSF7 CD151 MIR210HG CRACR2B AP2A2 MIR210 LOC171391 PANO1 CEND1 SIGIRR LOC101059906 TMEM80 B4GALNT4 ANO9 PKP3 SCT PDDC1 LRRC56 LOC143666 RPLP2 RNH1 SLC25A22 PTDSS2 TALDO1 PNPLA2 CHID1 POLR2L CDHR5
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain HRAS LOC101059906 DRD4 IRF7 DEAF1 SCT LMNTD2 PHRF1 RASSF7 LRRC56 LOC143666 MIR210HG RNH1 PTDSS2 MIR210 CDHR5
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TSPAN4 EPS8L2 SNORA52 PIDD1 HRAS DRD4 IRF7 DEAF1 LMNTD2 PHRF1 RASSF7 CD151 MIR210HG CRACR2B MIR210 LOC171391 PANO1 CEND1 LOC101059906 TMEM80 SCT PDDC1 LRRC56 LOC143666 RPLP2 RNH1 SLC25A22 PTDSS2 TALDO1 PNPLA2 CHID1 POLR2L CDHR5

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