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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88876726 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00661958_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 12 2501 NP_005178.4
NM_175931.2 11 2167 NP_787127.1
XM_005256323.4 11 2479 XP_005256380.1
AB010419.1 12 2370 BAA29061.1
AB010420.1 11 2167 BAA29062.1
AK090985.1 3 1179
AK097904.1 2 1317
BC047019.1 12 2351
BC062624.1 12 2371 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss CBFA2T3 TRAPPC2L LOC105371409 LOC100129697 LOC107987238 GALNS APRT LOC101927793 PABPN1L PIEZO1 CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CBFA2T3 LOC100289580 LOC107987238 GALNS LOC101927793 MIR4722 PABPN1L LINC00304 LOC339059 CTU2 TRAPPC2L CDH15 LOC105371409 LOC100129697 APRT ZNF778 LOC400558 PIEZO1 ACSF3 SLC22A31 CDT1
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion CBFA2T3 LOC101927793 PABPN1L
dgv507n67 Chr.16:88874423 - 88876971 on Build GRCh38 Gain CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss CBFA2T3 LOC107987238 GALNS LOC101927793 PABPN1L LINC00304 TRAPPC2L CDH15 LOC105371409 LOC100129697 APRT LOC400558 ACSF3 SLC22A31 CDT1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain CBFA2T3 LOC100289580 LOC107987238 GALNS LOC101927793 PABPN1L LOC105371414 LINC00304 LOC339059 TRAPPC2L CDH15 LOC105371409 LOC100129697 LOC100287036 APRT ZNF778 LOC400558 ANKRD11 PIEZO1 ACSF3 SLC22A31 CDT1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain CBFA2T3 TRAPPC2L LOC107987238 GALNS APRT LOC101927793 PABPN1L PIEZO1 CDT1
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CBFA2T3 LOC107987238 GALNS LOC101927793 PABPN1L LINC00304 TRAPPC2L CDH15 LOC105371409 LOC100129697 APRT LOC400558 ACSF3 CDT1
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion CBFA2T3 TRAPPC2L LOC105371409 LOC100129697 LOC107987238 GALNS APRT LOC101927793 PABPN1L CDT1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MVD GAS8 VPS9D1 SNAI3-AS1 MC1R LOC107987238 SPIRE2 GALNS MIR4722 PABPN1L CTU2 APRT PIEZO1 GAS8-AS1 SPATA2L CENPBD1 CYBA LOC105371419 DBNDD1 SNORD68 TUBB8P7 LOC105371414 LINC00304 TUBB3 LOC100129697 DPEP1 LOC101927817 ANKRD11 RPL13 CDT1 CDK10 SPATA33 CBFA2T3 LOC100289580 VPS9D1-AS1 LOC107984817 AFG3L1P FAM157C LOC101927793 LOC339059 TRAPPC2L CDH15 CHMP1A ZNF778 LOC400558 SNAI3 ACSF3 URAHP TCF25 RNF166 SPG7 DEF8 FANCA LOC105371409 ZNF276 LOC100287036 CPNE7 IL17C SLC22A31 PRDM7
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain CBFA2T3 TRAPPC2L GALNS PABPN1L
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain CBFA2T3 LOC100289580 LOC107987238 GALNS LOC101927793 MIR4722 PABPN1L LOC339059 CTU2 TRAPPC2L APRT PIEZO1 CDT1

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