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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88876726 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00661958_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 12 2501 NP_005178.4
NM_175931.2 11 2167 NP_787127.1
XM_005256323.4 11 2479 XP_005256380.1
AB010419.1 12 2370 BAA29061.1
AB010420.1 11 2167 BAA29062.1
AK090985.1 3 1179
AK097904.1 2 1317
BC047019.1 12 2351
BC062624.1 12 2371 AAH62624.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss PABPN1L CDT1 LOC101927793 LOC105371409 GALNS LOC100129697 PIEZO1 LOC107987238 TRAPPC2L CBFA2T3 APRT
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain SLC22A31 LOC339059 CDH15 LOC105371409 LOC100129697 ZNF778 LOC107987238 TRAPPC2L MIR4722 PABPN1L CDT1 LOC101927793 GALNS PIEZO1 CTU2 LINC00304 CBFA2T3 LOC100289580 APRT ACSF3 LOC400558
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion PABPN1L LOC101927793 CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss SLC22A31 CDH15 LOC105371409 LOC100129697 LOC107987238 TRAPPC2L PABPN1L CDT1 LOC101927793 GALNS LINC00304 CBFA2T3 APRT ACSF3 LOC400558
dgv507n67 Chr.16:88874423 - 88876971 on Build GRCh38 Gain CBFA2T3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain SLC22A31 LOC339059 CDH15 LOC105371409 LOC100129697 ZNF778 LOC105371414 LOC107987238 TRAPPC2L ANKRD11 PABPN1L CDT1 LOC100287036 LOC101927793 GALNS PIEZO1 LINC00304 CBFA2T3 LOC100289580 APRT ACSF3 LOC400558
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain PABPN1L CDT1 LOC101927793 GALNS PIEZO1 LOC107987238 TRAPPC2L CBFA2T3 APRT
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion PABPN1L CDT1 LOC101927793 LOC105371409 GALNS LOC100129697 LOC107987238 TRAPPC2L CBFA2T3 APRT
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CDH15 LOC105371409 LOC100129697 LOC107987238 TRAPPC2L PABPN1L CDT1 LOC101927793 GALNS LINC00304 CBFA2T3 APRT ACSF3 LOC400558
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss GAS8 TUBB3 TRAPPC2L IL17C ANKRD11 LOC101927817 PRDM7 CHMP1A LINC00304 CBFA2T3 MVD LOC105371409 RPL13 LOC107984817 CYBA CDT1 LOC100287036 GALNS CENPBD1 SNORD68 CTU2 GAS8-AS1 LOC105371419 SPIRE2 APRT ACSF3 SLC22A31 LOC339059 LOC100129697 ZNF778 FAM157C VPS9D1-AS1 VPS9D1 DEF8 RNF166 PABPN1L AFG3L1P PIEZO1 MC1R LOC100289580 CDK10 LOC400558 SNAI3 CDH15 FANCA URAHP LOC105371414 LOC107987238 TUBB8P7 MIR4722 DBNDD1 LOC101927793 DPEP1 SPG7 ZNF276 CPNE7 SPATA2L SNAI3-AS1 SPATA33 TCF25
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain PABPN1L GALNS TRAPPC2L CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC339059 LOC105371409 LOC100129697 LOC107987238 TRAPPC2L MIR4722 PABPN1L CDT1 LOC101927793 GALNS PIEZO1 CTU2 CBFA2T3 LOC100289580 APRT

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