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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:789547 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00663049_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 BAB15766.1
AK128869.1
AK293846.1
AK309804.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain RPUSD1 CHTF18 GNG13 PRR25 MIR662 MSLN
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain RPUSD1 CHTF18 GNG13 PRR25 MIR662 MSLN
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TBC1D24 RPS2 RHBDL1 SYNGR3 SOX8 LOC100134368 HAGH RPL23AP5 LOC105371046 PDPK1 CAPN15 GFER MIR6767 C16orf59 MIR4717 MIR3176 MIR5587 JMJD8 HBQ1 MRPL28 NME4 TSR3 RGS11 LOC729652 UNKL MIR4516 MSLN TMEM8A RNPS1 TSC2 TPSAB1 CASKIN1 RAB40C MPG MRPS34 STUB1 LOC100287175 RPUSD1 CEMP1 SPSB3 NOXO1 PRR35 TPSD1 CCNF SNORA64 ERVK13-1 NME3 RNF151 SNHG19 BRICD5 TELO2 FAM234A HS3ST6 MSRB1 FAM173A NARFL NTN3 IFT140 LMF1-AS1 ARHGDIG GNPTG PGP MLST8 LOC101929280 DNASE1L2 TRAF7 CRAMP1 METTL26 AMDHD2 C1QTNF8 RAB26 MIR6768 AXIN1 ABCA17P CHTF18 RPL3L LOC105371049 MIR3177 MAPK8IP3 MIR3180-5 EME2 UBE2I LOC107984876 LINC00235 MIR6859-4 PDIA2 CLCN7 SNORD60 HBA1 LOC106660606 GNG13 HBA2 METRN SSTR5-AS1 NDUFB10 HBM FLJ42627 SNRNP25 ATP6V0C WDR90 MIR940 LMF1 DECR2 PRR25 RHBDF1 FAHD1 NHLRC4 WFIKKN1 MIR6511B1 LINC00254 SNORA10 E4F1 LOC652276 SNHG9 CACNA1H DDX11L10 LOC105371184 ECI1 NPRL3 LOC107987233 HAGHL HN1L NUBP2 TMEM204 MIR3677 MIR1225 PRSS29P MIR3178 MCRIP2 WASIR2 MIR662 LUC7L KCTD5 WDR24 LOC105371047 SSTR5 FBXL16 PKD1 PIGQ TPSB2 SLC9A3R2 HBZ PTX4 RAB11FIP3 CCDC78 LOC105371045 CCDC154 BAIAP3 NTHL1 POLR3K TPSG1 C16orf91 ABCA3 ZNF598 LOC105371038 IGFALS MEIOB NPW SNORA78 RHOT2 TBL3 PRSS27
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss RHBDL1 CAPN15 GNG13 MCRIP2 FAM173A METRN MIR662 NARFL MIR3176 WDR24 MIR5587 JMJD8 FBXL16 PIGQ WDR90 RAB11FIP3 CCDC78 PRR25 LOC101929280 MSLN NHLRC4 WFIKKN1 METTL26 RAB40C LOC105371038 LOC105371184 STUB1 LOC100287175 RPUSD1 CHTF18 LOC107987233 HAGHL PRR35 LINC00235 RHOT2
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss RHBDL1 CAPN15 GNG13 MCRIP2 FAM173A METRN MIR662 NARFL MIR3176 WDR24 MIR5587 JMJD8 FBXL16 PIGQ WDR90 RAB11FIP3 CCDC78 PRR25 LOC101929280 MSLN NHLRC4 WFIKKN1 METTL26 RAB40C LOC105371038 LOC105371184 STUB1 LOC100287175 RPUSD1 CHTF18 LOC107987233 HAGHL PRR35 LINC00235 RHOT2
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion RHBDL1 SOX8 CAPN15 GNG13 MCRIP2 FAM173A METRN SSTR5-AS1 MIR662 NARFL MIR3176 WDR24 MIR5587 SSTR5 JMJD8 FBXL16 LMF1-AS1 PIGQ WDR90 LMF1 RAB11FIP3 CCDC78 PRR25 LOC101929280 MSLN NHLRC4 WFIKKN1 METTL26 C1QTNF8 RAB40C LOC105371038 LOC105371184 STUB1 LOC100287175 RPUSD1 CHTF18 LOC107987233 HAGHL PRR35 LOC107984876 LINC00235 RHOT2
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss RPUSD1 CHTF18 GNG13 PRR25
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RHBDL1 GNG13 MCRIP2 FAM173A METRN MIR662 NARFL WDR24 JMJD8 FBXL16 PIGQ WDR90 CCDC78 LOC101929280 MSLN WFIKKN1 METTL26 RAB40C LOC105371038 LOC105371184 STUB1 LOC100287175 RPUSD1 CHTF18 HAGHL RHOT2
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication RHBDL1 CAPN15 GNG13 MCRIP2 FAM173A METRN MIR662 NARFL MIR3176 WDR24 MIR5587 JMJD8 FBXL16 PIGQ WDR90 RAB11FIP3 CCDC78 PRR25 LOC101929280 MSLN NHLRC4 WFIKKN1 METTL26 RAB40C LOC105371038 LOC105371184 STUB1 LOC100287175 RPUSD1 CHTF18 LOC107987233 HAGHL PRR35 LINC00235 RHOT2
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss RPUSD1 CHTF18 GNG13
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss RPUSD1 CHTF18 GNG13 PRR25
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss RHBDL1 LOC105371038 GNG13 MCRIP2 LOC105371184 STUB1 FAM173A METRN MIR662 LOC100287175 NARFL RPUSD1 WDR24 JMJD8 CHTF18 FBXL16 HAGHL WDR90 CCDC78 RHOT2 MSLN
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss RPUSD1 CHTF18 MIR662 MSLN

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