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See other HAGH CNV Assays ›
Gene Symbol
HAGH
Assay Reference Genome
Location

Chr.16:1819979 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00669550_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3029

Gene Name:

 hydroxyacylglutathione hydrolase

Gene Aliases:

 GLO2, GLX2, GLXII, HAGH1

Location:

 Chr.16:1809099-1827194 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGH NM_001040427.1 5 853 NP_001035517.1
NM_001286249.1 4 757 NP_001273178.1
NM_005326.4 4 757 NP_005317.2
XM_011522469.2 4 397 XP_011520771.1
XM_011522470.2 4 395 XP_011520772.1
XM_017023195.1 4 322 XP_016878684.1
AK290155.1 4 322
AK298174.1 4 397
AK299173.1 4 388
AK299993.1 4 397
AK308825.1 4 365
BC000840.1 4 377 AAH00840.1
BC002627.2 4 706
BI758286.1
BU176541.1 5 458
DB502986.1
X90999.1 3 242 CAA62483.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv517196 Chr.16:1729694 - 1844960 on Build GRCh38 Gain+Loss NME3 MIR3177 IGFALS HAGH EME2 MAPK8IP3 SPSB3 FAHD1 MEIOB MRPS34 NUBP2
nsv571175 Chr.16:1806439 - 1875278 on Build GRCh38 Loss HAGH FAHD1 MEIOB
nsv1040440 Chr.16:1811739 - 1866102 on Build GRCh38 Gain HAGH FAHD1 MEIOB
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ABCA17P LOC100287175 CCDC154 MIR6768 HS3ST6 RAB40C PIGQ PRSS27 PDPK1 MIR6859-4 PTX4 NARFL ECI1 LOC105371184 MIR1225 MPG LOC105371049 KCTD5 FLJ42627 FBXL16 TSR3 CCNF DECR2 JMJD8 DDX11L10 CCDC78 HN1L TRAF7 RPL23AP5 MLST8 TBC1D24 E4F1 PDIA2 SNORA78 LMF1-AS1 CHTF18 NTN3 LINC00235 C16orf91 TMEM8A TPSAB1 RAB26 MRPS34 BRICD5 NOXO1 LOC652276 RAB11FIP3 SNORA64 MIR3177 UNKL POLR3K HBQ1 WASIR2 WDR24 NHLRC4 LOC105371047 MIR4516 TBL3 SNRNP25 LINC00254 MAPK8IP3 SNORA10 C16orf59 TSC2 HBZ FAM173A SSTR5-AS1 WDR90 SNHG19 MIR3180-5 LOC105371046 SYNGR3 NME4 LOC101929280 SNORD60 GFER MIR3178 MIR6767 SNHG9 GNPTG HAGHL TMEM204 BAIAP3 METRN LUC7L RPL3L MSLN HBA1 ERVK13-1 IFT140 HBA2 EME2 PRR35 RPUSD1 SSTR5 RNF151 TPSG1 ABCA3 WFIKKN1 MIR4717 NDUFB10 NTHL1 LOC107987233 FAHD1 PGP RPS2 MIR662 PKD1 CASKIN1 CAPN15 LOC105371038 LOC100134368 CEMP1 DNASE1L2 MIR6511B1 MCRIP2 HBM METTL26 FAM234A NUBP2 MIR3176 RGS11 CRAMP1 UBE2I MRPL28 RHBDF1 CACNA1H ARHGDIG AMDHD2 TPSD1 RHBDL1 AXIN1 LMF1 NPW ZNF598 NPRL3 PRR25 IGFALS HAGH CLCN7 RHOT2 MIR5587 PRSS29P STUB1 LOC106660606 MIR3677 MIR940 LOC729652 LOC105371045 C1QTNF8 RNPS1 TPSB2 ATP6V0C SPSB3 MEIOB MSRB1 TELO2 GNG13 NME3 LOC107984876 SLC9A3R2 SOX8
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss TMEM204 CRAMP1 MAPK8IP3 SPSB3 FAHD1 MEIOB MRPS34 TELO2 NME3 HN1L MIR3177 IGFALS HAGH LOC105371046 IFT140 EME2 LOC105371047 NUBP2
nsv1042986 Chr.16:1784723 - 1866102 on Build GRCh38 Loss IGFALS HAGH FAHD1 MEIOB NUBP2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss CRAMP1 MAPK8IP3 SPSB3 FAHD1 MEIOB MRPS34 NME3 HN1L MIR3177 IGFALS HAGH EME2 NUBP2
nsv457337 Chr.16:1813519 - 1855005 on Build GRCh38 Loss HAGH FAHD1 MEIOB
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion NME3 MIR3177 IGFALS HAGH EME2 MAPK8IP3 SPSB3 FAHD1 MRPS34 NUBP2
nsv571177 Chr.16:1817039 - 1897015 on Build GRCh38 Gain HAGH LINC00254 FAHD1 MEIOB

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