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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:407865 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00683091_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM3 IFITM5 IRF7 LRRC56 PTDSS2 RASSF7 IFITM1 SIGIRR ANO9 LOC143666 LMNTD2 B4GALNT4 MIR210 PKP3 IFITM2 RNH1 CDHR5 PHRF1 MIR210HG PGGHG LOC101059906 HRAS
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss B4GALNT4 PKP3 SIGIRR ANO9
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC2 SLC25A22 LOC101927503 RPLP2 LRRC56 RASSF7 AP2A2 SCT ANO9 LOC143666 CEND1 MUC6 B4GALNT4 PIDD1 MUC5AC TALDO1 RNH1 CDHR5 PHRF1 DEAF1 SNORA52 HRAS POLR2L MUC5B IRF7 PTDSS2 DRD4 CRACR2B MIR6744 TOLLIP SIGIRR CHID1 LMNTD2 TMEM80 MIR210 PKP3 PNPLA2 EPS8L2 CD151 LOC171391 MIR210HG PANO1 PDDC1 LOC101059906 TSPAN4
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain B4GALNT4 PKP3 SIGIRR ANO9
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion B4GALNT4 PKP3 PTDSS2 RNH1 SIGIRR ANO9
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain MIR6743 IFITM3 IFITM5 NLRP6 RIC8A ODF3 IFITM1 SIGIRR ANO9 B4GALNT4 PKP3 PSMD13 IFITM2 BET1L SIRT3 PGGHG
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion B4GALNT4 PKP3 PTDSS2 SIGIRR ANO9
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SLC25A22 RPLP2 LRRC56 RASSF7 AP2A2 SCT ANO9 LOC143666 CEND1 B4GALNT4 PIDD1 TALDO1 RNH1 CDHR5 PHRF1 DEAF1 SNORA52 HRAS POLR2L IRF7 PTDSS2 DRD4 CRACR2B SIGIRR CHID1 LMNTD2 TMEM80 MIR210 PKP3 PNPLA2 EPS8L2 CD151 LOC171391 MIR210HG PANO1 PDDC1 LOC101059906 TSPAN4
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss PKP3 SIGIRR

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