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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:407865 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00683091_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PHRF1 MIR210HG MIR210 IFITM2 PTDSS2 LRRC56 CDHR5 PGGHG RASSF7 LOC143666 IFITM3 IRF7 LOC101059906 IFITM5 IFITM1 HRAS ANO9 SIGIRR B4GALNT4 LMNTD2 PKP3 RNH1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TSPAN4 TOLLIP LOC101927503 MIR210HG MIR210 CEND1 CDHR5 MUC5B CHID1 LOC143666 MIR6744 CRACR2B IRF7 LOC101059906 ANO9 SIGIRR B4GALNT4 PKP3 SCT MUC5AC CD151 RNH1 MUC2 DRD4 SNORA52 PHRF1 SLC25A22 PANO1 PTDSS2 MUC6 LRRC56 RPLP2 PNPLA2 TMEM80 PIDD1 RASSF7 HRAS TALDO1 LMNTD2 DEAF1 AP2A2 EPS8L2 POLR2L LOC171391 PDDC1
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss ANO9 SIGIRR B4GALNT4 PKP3
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion ANO9 SIGIRR B4GALNT4 PTDSS2 PKP3 RNH1
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain ANO9 SIGIRR B4GALNT4 PKP3
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain MIR6743 PSMD13 ODF3 IFITM2 PTDSS2 PGGHG IFITM3 IFITM5 IFITM1 SIRT3 NLRP6 ANO9 BET1L SIGIRR B4GALNT4 PKP3 RIC8A
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion ANO9 SIGIRR B4GALNT4 PTDSS2 PKP3
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TSPAN4 MIR210HG MIR210 CEND1 CDHR5 CHID1 LOC143666 CRACR2B IRF7 LOC101059906 ANO9 SIGIRR B4GALNT4 PKP3 SCT CD151 RNH1 DRD4 SNORA52 PHRF1 SLC25A22 PANO1 PTDSS2 LRRC56 RPLP2 PNPLA2 TMEM80 PIDD1 RASSF7 HRAS TALDO1 LMNTD2 DEAF1 AP2A2 EPS8L2 POLR2L LOC171391 PDDC1
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss SIGIRR PKP3

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