Hs00693754_cn

• Gene Symbol: CNTFR
• Assay Reference Genome Location: Chr.9:34568909 on build GRCh38
• Cytoband: 9p13.3

Target Gene Details

• Entrez Gene ID: 1271
• Gene Name: ciliary neurotrophic factor receptor
• Gene Aliases: -
• Location: Chr.9:34551432-34590386 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CNTFR	NM_001207011.1			NP_001193940.1
	NM_001842.4			NP_001833.1
	NM_147164.2			NP_671693.1
	XM_017014260.1			XP_016869749.1
	XM_017014261.1			XP_016869750.1
	XM_017014262.1			XP_016869751.1
	XM_017014263.1			XP_016869752.1
	XM_017014264.1			XP_016869753.1
	XM_017014265.1			XP_016869754.1
	AL537375.3
	BC001492.2			AAH01492.1
	BI545014.1
	BI829871.1
	BT019824.1			AAV38627.1
	HQ628632.1
	M73238.1			AAA35707.1

Target Gene Details

• Entrez Gene ID: 415056
• Gene Name: CNTFR antisense RNA 1
• Gene Aliases: -
• Location: Chr.9:34568012-34583072 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CNTFR-AS1	NR_024369.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3620335	Chr.9:33871811 - 34738198 on Build GRCh38	Gain	DCAF12 SNORD121A ENHO NUDT2 LOC114224 UBAP2 SIGMAR1 SNORD121B CCL21 FAM219A KIF24 FAM205A DCTN3 GALT C9orf24 DNAI1 UBAP1 CNTFR CCL19 LOC730098 UBE2R2 KIAA1161 ARID3C CNTFR-AS1 RPP25L IL11RA CCL27
nsv1161857	Chr.9:34537279 - 34669174 on Build GRCh38	Deletion	DCTN3 GALT ARID3C CNTFR-AS1 CNTFR RPP25L IL11RA LOC730098 CCL27 SIGMAR1
dgv12659n54	Chr.9:34552439 - 34663141 on Build GRCh38	Loss	DCTN3 GALT ARID3C CNTFR-AS1 CNTFR RPP25L IL11RA CCL27 SIGMAR1
nsv831543	Chr.9:34431291 - 34615384 on Build GRCh38	Loss	DCTN3 DNAI1 FAM219A CNTFR-AS1 CNTFR RPP25L ENHO
nsv951699	Chr.9:34553903 - 34574802 on Build GRCh38	Deletion	CNTFR-AS1 CNTFR
nsv818699	Chr.9:34535211 - 34685943 on Build GRCh38	Gain	DCTN3 GALT ARID3C CNTFR-AS1 CNTFR RPP25L IL11RA LOC730098 CCL27 SIGMAR1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

suckling behavior
brainstem development
signal transduction
nervous system development
sex differentiation
positive regulation of cell proliferation
negative regulation of neuron apoptotic process
skeletal muscle organ development
ciliary neurotrophic factor-mediated signaling pathway

Function(s)

ciliary neurotrophic factor receptor activity
receptor binding
protein binding
cytokine binding